Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi03g1247 ATGAAAGATGTATGGACTGTGGTGCATGGGTTGAAACCAGGGATTCTAATGGTGGTGGTGCAGATATCATTTGGTGCAGTGAATGTTCTGTACAAGCTTGCCGTTAACGATGGCATGAGCCTCAGAGTTGTGGTTGCCTATCGCTTTATTTTCGCCACTGCTTTCATAGCTCCTCTTGCTCTCATTTTAGAAAGGAAGAAGAGGGCAGAGATGACATGGAGGATAATGTTTCAAGCATTTCTGTGTGGCTTATTTGGAGGAGCATTGGCCCAAAACTTTTACTTGGAGGCAATGAAATTAACATCGGCAACGTTTGCTTCCGCCATGGCCAACCTCATTCCAGCCATAACCTTTGTCATTGCTGTGTTTTTTGGTATGGAAAAATTAAATTTGAAAACAGCAGGAGGAAAGGCTAAAATAATAGGAACATTGACTGGAATTGGAGGGGCAATGTTATTGACTTTCTTCAAAGGTAAGGCCATTGAAATGGGTTCCTTCCACCCAAACCTTCTGCACCACCCAAACAATGACCACGTGGCGTCACCACAAGCTCTCTCAGGTGGTAGCACCGTCTTGGGTGCACTCTGCTCCTTCGCTAGTTGCTTCTCTTATGCACTGTGGCTCATCGTTCAGGCTAAGATGAGTGAGAAATACCCAAATCATTACTCAAGCACAGCTTTGATGTCTCTAATGGCAGCACTGTTATCCACTGTGTTTGCTCTTTGCCTTGAGAGAGATTGGAGTCAATGGAGGTTGCGTTGGAATGTCAGGCTTCTAACTGTGGCTTATTCGGGAATAGTGGCTTCTGGCGTAATGGTGGTTGTGATTTCATGGTGTGTATACATGAGAGGCCCACTGTTTGTGTCTATTTTCAACCCTCTGATGCTTGTGATTGTGGTCTTTGCTGGTTCTTTCCTGCTGCAAGAGAAGCTACACCTTGGAAGTGTAATAGGAGCAGTGTTGATAGTGTGTGGATTATACTTGGTGTTATGGGGGAAAGGGAAAGAGATGAAGAAGCTGAATCAATTAGTGCCATCACCAGAAAGCCCCCACAATCATCAATCAGCAGACGCAGTCCAAATCATGATCCACGACGCCTGTGACTGTGAGGAACGACATAATAAAGCCAACAATAATATTGCTGCTGCTGCTGCTGCTGGAGATCATCGAGATTCCTCAGAAAATGGTCGCCATGAAGAACAAGAAGAAGAAGAAGGTGAGGAGGAAGTAACTTCTGGGAAATATTGA 1248 0.4487 MKDVWTVVHGLKPGILMVVVQISFGAVNVLYKLAVNDGMSLRVVVAYRFIFATAFIAPLALILERKKRAEMTWRIMFQAFLCGLFGGALAQNFYLEAMKLTSATFASAMANLIPAITFVIAVFFGMEKLNLKTAGGKAKIIGTLTGIGGAMLLTFFKGKAIEMGSFHPNLLHHPNNDHVASPQALSGGSTVLGALCSFASCFSYALWLIVQAKMSEKYPNHYSSTALMSLMAALLSTVFALCLERDWSQWRLRWNVRLLTVAYSGIVASGVMVVVISWCVYMRGPLFVSIFNPLMLVIVVFAGSFLLQEKLHLGSVIGAVLIVCGLYLVLWGKGKEMKKLNQLVPSPESPHNHQSADAVQIMIHDACDCEERHNKANNNIAAAAAAGDHRDSSENGRHEEQEEEEGEEEVTSGKY 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi03g1247 415 SUPERFAMILY Multidrug resistance efflux transporter EmrE 230 335 - -
Glsi03g1247 415 PANTHER WAT1-RELATED PROTEIN 14 346 IPR030184 GO:0016020|GO:0022857
Glsi03g1247 415 MobiDBLite consensus disorder prediction 378 415 - -
Glsi03g1247 415 Pfam EamA-like transporter family 15 153 IPR000620 GO:0016020
Glsi03g1247 415 Pfam EamA-like transporter family 192 330 IPR000620 GO:0016020
Glsi03g1247 415 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi03g1247 Glsi-ChrGlsi03 74505311 74512082 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi03g1247 11 357 Nodulin-like Gene Family AT1G25270 43.228 2.31e-97 293