Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi03g1238 ATGGCTGCCACTGGACCCTTTGGTTTGGTTTCATTCAACAATGTAAGTGTAGTTCCATGCCAAGAAAATGAAAATGATCAGAAAGAAACCCCAGTTCATGATGAAGATTCTCATTTCGACTACTCTCAAAGATCGCAGTGGCTTCGTGCTGCTCTATTAGGAGCCAATGATGGGTTGGTTTCCGTTGCTGCATTGATGATGGGTGTAGGAGCTGTTAAGGAAGATGTGAAAGCCATGCTTCTTGCTGGTTTTGCAGGGTCAGTTGCGGGGGCTTGCAGCATGGCAATAGGAGAGTTTGTCTCTGTGTACACTCAGTATGAAGTTGAAATTGCCCAAATGAAGAGAGATATGAATATGAATAGTAATGGAAAAGAGAGCGAAGAAGAAGACATTGAGATGCAAAAGGAGAAGGGGAATTTGCCAAACCCATTTCAGGCTGCTTTTGCATCAGCGTTCTCATTCTCCATAGGAGCACTGGTTCCTCTACTTGCAGCTGCATTCATAACAGATTACAACATAAGGCTTATGGTGATTGTGGCAGTGGCTAGCTTGGCTTTGGTGGTCTTTGGAGGGGTAGGAGCTGTGTTGGGAAACACTCCTGCGAAAAGGTCTTGTGTGAGGGTTCTGGTTGGGGGATGGGTAGCTATGGCTATCACTTTTGGGCTAACCAAATCGACTCACCCACTGACCCACAAGTCCAGCCTTGCTTCTCAGAGCGTTTCTGCAAAATTAAGGCATTGGGAAGCCGACCGTGACAGAACCATTTCATTGGAAGCTGGTTTCCGTGCCCCACAGTCCTCCTTAGAGCTGACAGCAGAGTGGGTTCTGGCTTTTATATCTCTTGCAGAAGTGAGATCCGTTGCAGGAGCTTGCAGCATGGCAATAGGAGAGTTTGTCTCTGTGTACACTCAGTATGAAGTTGAAATTGCCCAAATGAAGAGAGATATGAATATGAGTAGTAATGGAAAAGAGAGTGAAGAAGAAGACATTGAGATGCAAAAGGAGAAGAGGAAATTTCCAAACCCATTTCAGGCTGCTTTTGCATCAGCGTTCTCATTCTCCATAGGAGCACTGGTTCCTCTACTTGCAGCTGCATTCATAACAGATTACAAGATACGGCTCACGGTGATTGTGGTGGTGGCTAGCTTGGCTTTGGTGGTCTTTGGAGGGATAGGAGCTGTGCTTGGAAAGACTCCCGCGATAAGGCCTTGTGTGAGGGTTCTGCTTGGGGGATGGGTAGCTATGGCTATCACTTTTGGGTTAACCAAGTTACTGCGTTATGGTGGATTGCAGCTATGA 1299 0.4634 MAATGPFGLVSFNNVSVVPCQENENDQKETPVHDEDSHFDYSQRSQWLRAALLGANDGLVSVAALMMGVGAVKEDVKAMLLAGFAGSVAGACSMAIGEFVSVYTQYEVEIAQMKRDMNMNSNGKESEEEDIEMQKEKGNLPNPFQAAFASAFSFSIGALVPLLAAAFITDYNIRLMVIVAVASLALVVFGGVGAVLGNTPAKRSCVRVLVGGWVAMAITFGLTKSTHPLTHKSSLASQSVSAKLRHWEADRDRTISLEAGFRAPQSSLELTAEWVLAFISLAEVRSVAGACSMAIGEFVSVYTQYEVEIAQMKRDMNMSSNGKESEEEDIEMQKEKRKFPNPFQAAFASAFSFSIGALVPLLAAAFITDYKIRLTVIVVVASLALVVFGGIGAVLGKTPAIRPCVRVLLGGWVAMAITFGLTKLLRYGGLQL 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi03g1238 432 CDD Nodulin-21 46 201 - -
Glsi03g1238 432 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 24 225 IPR008217 GO:0005384|GO:0030026
Glsi03g1238 432 Pfam VIT family 329 422 IPR008217 GO:0005384|GO:0030026
Glsi03g1238 432 Pfam VIT family 128 223 IPR008217 GO:0005384|GO:0030026
Glsi03g1238 432 Pfam VIT family 48 128 IPR008217 GO:0005384|GO:0030026
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi03g1238 Glsi-ChrGlsi03 74408435 74414799 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi03g1238 287 430 Nodulin-like Gene Family AT3G43660 58.333 2.73e-51 170