Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi03g1234 ATGGCTGCCTCTGGATCCTGTGGTTTGGTTTCATTCAACAATGTAGGTGTAGTTCCAAGCCAAGAAAATGAAAATGATCAGAAAGAAACCCCAGTTCATGATGAAGATTCTCATTTCGACTACTCTCAAAGATCACAATGGCTTCGTGCAGCTCTATTAGGAGCCAATGATGGGTTAGTTTCTGTTGCTGCATTGATGATGGGTGTAGGAGCTGTTAAAGAAGATGTGAAAGCCATGCTTCTTGCTGGTTTTGCAGGGTCAATTGCAGGAGCTTGCAGCATGGCAATAGGAGAGTTTGTCTCTGTGTACACTCAGTATGAAGTTGAAATTGCCCAAATGAAGAGAGATATGAATATGAATAGTAATGGAAAAGAGAGCGAAGAAGAAGACATTGAGATGCAAAAGGAGAAGGGGAAATTGCCAAACCCATTTCAGGCTGCTTTTGCATCGGCCTTCTCATTCTCCATAGGAGCACTGGTTCCTCTACTTGCAGCTGCATTCATAACAGATTACAAGATAAGGCTCATGGTGGTTGTGGCAGTGGCTAGCTTGGCTTTGGTGGTCTTTGGAGGGGTAGGAGCTGTGCTGGGAAAGACTCCTATGATAAGGTCTTGTGTGAGGGTTCTGGTTGGGGGATGGGTAGCAATGGCTATTACTTTTGGGTTAACCAAGTTACTAGCTTCTTGTGGATTGCAGTTATGA 702 0.4416 MAASGSCGLVSFNNVGVVPSQENENDQKETPVHDEDSHFDYSQRSQWLRAALLGANDGLVSVAALMMGVGAVKEDVKAMLLAGFAGSIAGACSMAIGEFVSVYTQYEVEIAQMKRDMNMNSNGKESEEEDIEMQKEKGKLPNPFQAAFASAFSFSIGALVPLLAAAFITDYKIRLMVVVAVASLALVVFGGVGAVLGKTPMIRSCVRVLVGGWVAMAITFGLTKLLASCGLQL 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi03g1234 233 Pfam VIT family 128 223 IPR008217 GO:0005384|GO:0030026
Glsi03g1234 233 Pfam VIT family 48 129 IPR008217 GO:0005384|GO:0030026
Glsi03g1234 233 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 23 227 IPR008217 GO:0005384|GO:0030026
Glsi03g1234 233 CDD Nodulin-21 46 200 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi03g1234 Glsi-ChrGlsi03 74380228 74380929 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi03g1234 21 231 Nodulin-like Gene Family AT3G43660 60.190 1.18e-90 263