Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi03g1230 ATGGCTTCTGACCATATTGAGATTCCTGTTCATGCTAATTATGAGGATGCAAAACCAAGCCAAGGCGCTGAAGAGAACAATATCAACTACTTTCAAAGGGCACAATGGCTTAGGGCAGCTGTGTTGGGAGCCAACGATGGTTTGATCACCGTGACATCACTGATGATGGGTGTTGGTGCTGTGAAAGAGGACATCAAAGCCATGCTTCTTGCCGGCTTTGCAGGCCTAGTTGCCGGGGCTTGTAGCATGGCAATCGGTGAGTTTGTCTCAGTTTACACTCAACTAGACATAGAGTTAGCTCAAATGAAGAGAGAAAAAGAACTAGGGGATGAAAAGGAGAAGCTGCCAAACCCATTTCAGGCTGCCATAGCATCAGCACTTGCATTTTGTGTTGGTGCTGTGGTGCCTCTGCTGGGAGCTGTGTTTATAAGGGACTATAGGATCAGGTTGGGTGTTGTTTTTGCTCTTGCTAGCTTGGCATTGCTGGTTTTTGGAGGTGTAGGAGCAGTGATTGGTAAGACTTCAGTGAGGAGGTCATGTGTTAGAGTGCTTATTGGAGGTTGGATGGCTATAGCTATAACTTTTGGCCTCACCAAGTTGATTGGCTTTACTGGGCTTTGA 621 0.4654 MASDHIEIPVHANYEDAKPSQGAEENNINYFQRAQWLRAAVLGANDGLITVTSLMMGVGAVKEDIKAMLLAGFAGLVAGACSMAIGEFVSVYTQLDIELAQMKREKELGDEKEKLPNPFQAAIASALAFCVGAVVPLLGAVFIRDYRIRLGVVFALASLALLVFGGVGAVIGKTSVRRSCVRVLIGGWMAIAITFGLTKLIGFTGL 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi03g1230 206 CDD Nodulin-21 35 175 - -
Glsi03g1230 206 Pfam VIT family 37 111 IPR008217 GO:0005384|GO:0030026
Glsi03g1230 206 Pfam VIT family 107 198 IPR008217 GO:0005384|GO:0030026
Glsi03g1230 206 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 19 201 IPR008217 GO:0005384|GO:0030026
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi03g1230 Glsi-ChrGlsi03 74341136 74341756 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi03g1230 24 206 Nodulin-like Gene Family AT3G43660 66.667 9.27e-88 255