Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi03g1229 ATGGCTTCTGACCATATTGAGATTCCTGTTCATGCTAATTATGTGGATGCAAAACCAAGCCAAAGCGCTGAAGAGAACAATATCAACTACTTTCAAAGGGCACAATGGCTTAGGGCAGCTGTGTTGGGAGCCAATGATGGGTTGGTCACTGTGACTTCACTGATGATGGGTATTGGTGCTGTGAAAGAAGACATCAGAGTCATGCTTCTTGCCGGCTTTGCAGGCCTAGTTGCCGGGGCTTGTAGCATGGCAATCGGCGAGTTTGTCTCAGTGTACACTCAACTAGACATAGAGTTAGCTCAAATGAAGAGAGAGAAAGAACCAGGGGATGAAAAGGAGAATCTGCCAAACCCATTTCAGGCTGCCATAGCATCAGCACTTGCATTTTGTGTTGGTGCTATGGTGCCTCTGCTGGGAGCTGTGTTTATAAGGGACTATAGGATCAGGCTGGGTGTTGTTGCAGCTCTTGCTAGCTTGGCATTGCTGGTTTTTGGAGGCGTAGGAGCAGTGATTGGTAAGACTTCAGTGAGGAGGTCTTGCGTCAGAGTGCTGATTGGAGGTTGGATGGCTATGGCTATAACTTTTGGCCTCACCAAGTTGATTGGTTTTACTGGACTTTGA 621 0.4734 MASDHIEIPVHANYVDAKPSQSAEENNINYFQRAQWLRAAVLGANDGLVTVTSLMMGIGAVKEDIRVMLLAGFAGLVAGACSMAIGEFVSVYTQLDIELAQMKREKEPGDEKENLPNPFQAAIASALAFCVGAMVPLLGAVFIRDYRIRLGVVAALASLALLVFGGVGAVIGKTSVRRSCVRVLIGGWMAMAITFGLTKLIGFTGL 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi03g1229 206 Pfam VIT family 102 198 IPR008217 GO:0005384|GO:0030026
Glsi03g1229 206 Pfam VIT family 37 110 IPR008217 GO:0005384|GO:0030026
Glsi03g1229 206 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 20 201 IPR008217 GO:0005384|GO:0030026
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi03g1229 Glsi-ChrGlsi03 74337101 74337721 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi03g1229 21 206 Nodulin-like Gene Family AT3G43660 67.204 7.19e-90 260