Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi03g1222 ATGGGAGATCATCACAATGTTAATCTTCCACCTGGCTTTCGTTTTTACCCAACAGATGAAGAGCTTATAGTCCATTTCCTTCACAGAAAGGCAGCTCTCTTACCTTGCCACCCAGATGTCATCCCTGATCTCGAGCTCTTTCCCTATGATCCATGGGAGCTTGAAGGTAAAGCTTTGGCAGAGGGGCAACAATGGTACTACTACAGCAGAAGGACACAAAATAGGGTGACTGACAATGGGTATTGGAAGCCAATGGGGATGGAAGAACCAGTGGTGACAAGCTCAGGGAATAAGATTGTTGGAATGAAGAAATATTTTGTGTTTCATGTGGGAGAAGCCCCATCTGGTACCAAAACCAATTGGATAATGCAAGAGTATCGTCTATCAGATTCTGCTTCATCTTCTTCTTCTAGCAGATCATCATCAAAAAGAAAAGTACAACAAAAACCAGATTATAGTAAATGGGTGATTTGTAGAGTTTACGAGCGCGATGATGACGATGATGGAACAGAGCTGTCTTGTTTGGATGAAGTTTTCTTGTCATTGGATGATCTCGAAGAAATAAGCTTGCCAAATTAG 579 0.4197 MGDHHNVNLPPGFRFYPTDEELIVHFLHRKAALLPCHPDVIPDLELFPYDPWELEGKALAEGQQWYYYSRRTQNRVTDNGYWKPMGMEEPVVTSSGNKIVGMKKYFVFHVGEAPSGTKTNWIMQEYRLSDSASSSSSSRSSSKRKVQQKPDYSKWVICRVYERDDDDDGTELSCLDEVFLSLDDLEEISLPN 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi03g1222 192 MobiDBLite consensus disorder prediction 132 151 - -
Glsi03g1222 192 ProSiteProfiles NAC domain profile. 9 163 IPR003441 GO:0003677|GO:0006355
Glsi03g1222 192 Gene3D NAC domain 18 167 IPR036093 GO:0003677|GO:0006355
Glsi03g1222 192 Pfam No apical meristem (NAM) protein 10 128 IPR003441 GO:0003677|GO:0006355
Glsi03g1222 192 FunFam NAC domain-containing protein 104 18 166 - -
Glsi03g1222 192 SUPERFAMILY NAC domain 7 162 IPR036093 GO:0003677|GO:0006355
Glsi03g1222 192 PANTHER NAC TRANSCRIPTION FACTOR 56 9 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi03g1222 Glsi-ChrGlsi03 74186013 74186796 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi03g1222 8 188 NAC Transcription Factor Family AT1G61110 37.566 1.27e-42 143
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Glsi03g1222 NAM 2.6e-29 No_clan