Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi03g1220 ATGACGTTGAGTCCAAGCTTTCAACCGTACGCTGAGAATCTCGACGTTAGCTCACCGCTCGTACGTTACTTCCGCGCCGGATCTCCAATTTCCAGTAAAGTCTCGTCTTCTGGCGAGTCCTTTACTTCTCCGACGTTTGGCTCCAGCAAGTACAGGTCTGCGATAGTGCAACAGTACAACAGTAACAGTTCGGGGAACACTAGCTTCGGATCTCGAGGTCGATTTTCTCTTTCGCCACTGTCCTCAATTGAGAATTTGGATATCGCGCCGCTGATGTCGCCGCCGGTGTACAGAACGCCGGTGAAGGTGGATGAGGAAGTTCTTGTGATGGACGACATTCAGGTGAGGTCAACGTCGGGAGGAAAGAGCGGACGGTCTTCATCAGCTTCTTGCGGCGGGGCTTTCTCGTCATCATCTTCGTCGGGGAAGAGTATGTTCAAGACTGATATTTGCAGAGCGTGGGAGGAATCTGGAAACTGCCGCTACTTCTCCAAATGTCAGATTATTATTCTTCTTCTTCTTCTCTTCCTTTTTTCTTCTTCCGTTGTCTTCTCGCCGCGCACAAGCACCCCGCATAGAGGACTCCACCACCACCCACCATATGCCAGCACAGCCACTGTCACTGCCACCAACGGCGGGGTCTTGAAATCTGCGGCGTCTTTATTTACTGAGAAAACTTCTGCATTTTCTTCTGCTATTCTTGAGCTGAAATCGAAGTTCTTGCTTAATCAATCTTTGCATGTCAGAGCCGATATTACCATTTTAGATAAGACTGTGACGTTCGGGTGTCCGCCGATGGTGGCGGTGGCGGTGCTGCGGCGTGTGCCAGATGATTCTGCCACTGATTCTTCTCTTTGCTCCGATATGGAATTTGCACATGGAAAACAAGAGCTACGTCCAACTCGTCTTTCCATCAAGGACAAATCTGAGGCACAGGCGAGCAAATCATCTTCTAGTACAAGATCATGCACAAATGGCCCAAGAAGTCGCACTGGCAATCAGTTCCAGGCAGCAGATGGATCTGAAGATGCAGTTACAACATCCCAACCAGCTTCGCCCGTTAAACCTGAACCTGACCATACCCTTGCCAATTTTAACCACATCAGTGACTGGTCACCCCTGGATGATGACATTGAGCTTGAACTCCCACATTATGGGTCTCCTTTAAGTCCTCGAATGTGGATGTCTTTGCAAGTAGAGGGTTTTGGTCTCCAAGAGAAGCTATACGCCTATACGAAGGCGTTAGAATTTAGACAGTCTCGTCTGCATCCCGAGTCTTATCCCAATTTGGAAAGCAAAGATATGGAGGGAGACCAAGGCTCCTTTGCTACAGGCCCCACGCAATGCGATAACCAGTCTCGGCTCTACGAAGCGTACAATGAGCTTCATGGGCTTGCTCAAGAGTTTGAGACGCCGTTCGACGCGCCGGCCGTGTTGGTGGTGGGCCACCAGACTGATGGCAAGAGCGCCCTCGTCGAAGCCCTCATGGGCTTTCAGTTCAACCATGTCGGTGGCGGCACCAAGACCAGGCGACCCATTACACTCCACATGAAGTACGACCCTGAGTGTGAATCCCCTTTGTGTTATCTTGTCTCAGATGCTGATCCCACTTTGGCAGAAGAGAAGTCTCTTATGGAAATTCAGGAATATATTGAAGCTGAAAATGTGAGGTTGGAGCATGAGTCTTGTCAATTCTCAGCCAAGGAAATAATTATTAAAGTGGAATACAAATATTGCCCAAATCTTACAATCATAGACACTCCTGGACTTATTGCTCCTGCTCCTGGTCGAAAGAATAGAGTATTACAGGTTCAGGCTCGTGCAGTAGAGTCACTAGTGCGGGCAAAAATGCAACATAAGGAATTCATTATATTGTGTCTTGAAGATTGTAGTGACTGGAGCAATGCAACTACACGACGCATAGTAATGCAGATTGATCCAGAGTTGTCAAGGACAGTAATTGTCTCAACCAAGCTAGATACTAGGATACCTCAATTTGCACGTTCATCAGATGTTGAAGTTTTCCTTTCACCGCCTGCATGTACACTTGATGGCTGCATTCTGGGTGACTCTCCCTTCTTCACATCTGTGCCTTCTGGAAGAGTCGGTTCTGGAAGTGATTCTGTGTATAGGTCCCATGATGAGTTCAAACAGGCTGTATGCTTGAGAGAGATGGAAGATGTTGCATCTTTAGAGGAGAAGTTGGGCAGGACATTGTCAAAGCAAGAAAGAAGTAGGATAGGTGTAAGCAAACTTAGGTTATTCCTGGAAGAAATGCTACAAAAGAGGTATATGGATAGCGTGCCATTGATCATTCCACTTCTTGAGAAGGAGTATCGGAGTGTAACAAGGAGATTAAATGATATTTATCAAGAATTGAGTTCACTGGATGAAGCCAAACTGAAGGAAAAAGGAAGAGCCTTCCATGATCTGTTCTTGACCAAGTTGTCATTGCTGCTTAAAGGGACAGTTGTTGCACCTCCTGATAAGTTTGGTGAAACACTACAAGATGAGCGAATAAATGGAGGAGCATTTGTTGGCACTGATGGGGTTCAGTTCCCTTGCAAGCTAATCCCTAATGCAGGAATGCATCTTTATGGTGGTGCACAATATCATCGGGCAATGGCTGAATTCCGTTTTGTTGTTGGAGGAATCAAGTGTCCCCCAATAACACGGGAGGAAATCGTAAATGCTTGTGGAGTTGAAGATATTCATGATGGAACAAATTACTCTAGGACTGCTTGTGTAATTGCTGTTGCAAAGGCTCGTGACACATTCGAACCTTTTCTTCATCAGTTGGCCTCTAGACTGTTGCATATACTTAAGAGACTGCTTCCCATCTCCGTATATCTTCTTCAGAAAGATGGCGAGTATCTCAGTGGCCATGAGGTGTTCCTCAGGCGTGTCGCTTCTGCCTTCAATAACTTTGCAGAATCTACTGAGAAATCATGCCGTGAAAAATGTATGGAGGACTTGGTAAGCACCACCCGTTATGTGTCATGGTCTCTCCACAATAAGAATCGGGCTGGGTTACGCCACTTCTTAGATTCATTTGGTGGAACAGATCATTCCAATGTTTCTGGTAATTCTGCAGCAAATGGTCTATCACAAACCAGTGCACATGAGAAAGAGGACACAAAGCCACGACCTGATGTAAAACTCAGTCATTTGGCCTCTAGCATTGATTCCACCACATCTATTCAGACAATAGAAACAAAGCTTGCTGACCTTCTGGATAGTACACTTTGGAATCGGAGGCTAGCTCCTTCATCTGAAAGGATTGTATATGCTTTGGTCCAACAGATATTTCATGGCATAAGAGAGTATTTCTTGGCTTCCACCGAATTAAAGTTCAACTGTTTCCTTTTGATGCCCATTGTGGACAAGTTGCCTGCACTTCTTCGGGAAGACCTAGAATCTGCTTTTGAAGATGATCTAGATAATGTTTTTGACATAACCAATCTGCGACACTCCTTGGGCCAGCAGAAGAGAGATACTGAAATTGAACTGAAGAGGATCAAGAGGCTGAGAGAGAAGTTCAGAATGATACATGAGCAGCTAAGTCTACATCAAGCCATGTAA 3582 0.4598 MTLSPSFQPYAENLDVSSPLVRYFRAGSPISSKVSSSGESFTSPTFGSSKYRSAIVQQYNSNSSGNTSFGSRGRFSLSPLSSIENLDIAPLMSPPVYRTPVKVDEEVLVMDDIQVRSTSGGKSGRSSSASCGGAFSSSSSSGKSMFKTDICRAWEESGNCRYFSKCQIIILLLLLFLFSSSVVFSPRTSTPHRGLHHHPPYASTATVTATNGGVLKSAASLFTEKTSAFSSAILELKSKFLLNQSLHVRADITILDKTVTFGCPPMVAVAVLRRVPDDSATDSSLCSDMEFAHGKQELRPTRLSIKDKSEAQASKSSSSTRSCTNGPRSRTGNQFQAADGSEDAVTTSQPASPVKPEPDHTLANFNHISDWSPLDDDIELELPHYGSPLSPRMWMSLQVEGFGLQEKLYAYTKALEFRQSRLHPESYPNLESKDMEGDQGSFATGPTQCDNQSRLYEAYNELHGLAQEFETPFDAPAVLVVGHQTDGKSALVEALMGFQFNHVGGGTKTRRPITLHMKYDPECESPLCYLVSDADPTLAEEKSLMEIQEYIEAENVRLEHESCQFSAKEIIIKVEYKYCPNLTIIDTPGLIAPAPGRKNRVLQVQARAVESLVRAKMQHKEFIILCLEDCSDWSNATTRRIVMQIDPELSRTVIVSTKLDTRIPQFARSSDVEVFLSPPACTLDGCILGDSPFFTSVPSGRVGSGSDSVYRSHDEFKQAVCLREMEDVASLEEKLGRTLSKQERSRIGVSKLRLFLEEMLQKRYMDSVPLIIPLLEKEYRSVTRRLNDIYQELSSLDEAKLKEKGRAFHDLFLTKLSLLLKGTVVAPPDKFGETLQDERINGGAFVGTDGVQFPCKLIPNAGMHLYGGAQYHRAMAEFRFVVGGIKCPPITREEIVNACGVEDIHDGTNYSRTACVIAVAKARDTFEPFLHQLASRLLHILKRLLPISVYLLQKDGEYLSGHEVFLRRVASAFNNFAESTEKSCREKCMEDLVSTTRYVSWSLHNKNRAGLRHFLDSFGGTDHSNVSGNSAANGLSQTSAHEKEDTKPRPDVKLSHLASSIDSTTSIQTIETKLADLLDSTLWNRRLAPSSERIVYALVQQIFHGIREYFLASTELKFNCFLLMPIVDKLPALLREDLESAFEDDLDNVFDITNLRHSLGQQKRDTEIELKRIKRLREKFRMIHEQLSLHQAM 1193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi03g1220 1193 FunFam Dynamin-like protein ARC5 453 821 - -
Glsi03g1220 1193 ProSiteProfiles Dynamin-type guanine nucleotide-binding (G) domain profile. 472 769 IPR030381 GO:0005525
Glsi03g1220 1193 Gene3D - 138 168 - -
Glsi03g1220 1193 Gene3D - 453 821 IPR027417 -
Glsi03g1220 1193 PRINTS Dynamin signature 500 517 IPR022812 -
Glsi03g1220 1193 PRINTS Dynamin signature 647 663 IPR022812 -
Glsi03g1220 1193 PRINTS Dynamin signature 576 593 IPR022812 -
Glsi03g1220 1193 PRINTS Dynamin signature 475 493 IPR022812 -
Glsi03g1220 1193 Pfam Dynamin family 478 658 IPR045063 -
Glsi03g1220 1193 MobiDBLite consensus disorder prediction 117 144 - -
Glsi03g1220 1193 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 451 777 IPR027417 -
Glsi03g1220 1193 MobiDBLite consensus disorder prediction 310 354 - -
Glsi03g1220 1193 MobiDBLite consensus disorder prediction 1029 1051 - -
Glsi03g1220 1193 SMART dynamin_3 452 675 IPR001401 GO:0003924|GO:0005525
Glsi03g1220 1193 MobiDBLite consensus disorder prediction 297 367 - -
Glsi03g1220 1193 PANTHER DYNAMIN 455 1171 IPR022812 -
Glsi03g1220 1193 CDD DLP_1 473 769 IPR001401 GO:0003924|GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi03g1220 Glsi-ChrGlsi03 74149471 74169499 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Glsi03g1220 Dynamin_N 3.2e-30 CL0023