Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi03g1214 ATGTTACCACAGCTTTACGTGGTACAATTGGGCATATATATAGCACCAGAGTGCTTCTCAATTGGAAAGACGTCAGAGAAGACTGATGTTTTTGGATATGGTTTTATGCTCCTTGAGCTAATAACTGGACAGAGGGCTTTTGACCTCGCACAACTTGCCAACAACCATGATCTCATGTTGCTTGATTGGGGAAATTATAATGAAGAGGAGGTAGAGCAGCTAACCCAATTGGCCTTACTATGCACACAAGACTCTCCGCTGGAAAGATCCAAAAAGTCTGAGGTGGTCAGAATGCTAGAAGTCGAAGGTTTGGCTGAAAAGTGGGAGCAATGGCAGAAAAAAGCTTTGCAGCAAGATTTCCAGCTCACCCATCACCCCAATTTTAATTGGTTGGTAGACTCAACTTCACATATCAGTGATCTTGGAGATGGGAACCTTTCGGGTCAACTGATTCCACAACTTGGACATGCAGCTCTCAAATTTGATGTATTTGCGAACGAAGGATTTAAGCACTCAGAACGAGAAACAATAGTTGTTCATTTTGATGCAAATTTGAGCAATGAAAACTGTGTTTCTGAATTTCTGGCCACCCATGGCATTATGTGCTTAACTCTACAAGATAGCCATTGTTTTTCAATTGCTACAGTCAGTCAGGCTTGCAATGTTAGGATTACCACGTTATGGTTTAACCATTCTCATAAAAGTCTTTTAGTGAGTTCCAAGTATGAAATTAGAATATCAAATTTTCTTAGTGGTCAAGTGAGTTACTGTTGA 774 0.4044 MLPQLYVVQLGIYIAPECFSIGKTSEKTDVFGYGFMLLELITGQRAFDLAQLANNHDLMLLDWGNYNEEEVEQLTQLALLCTQDSPLERSKKSEVVRMLEVEGLAEKWEQWQKKALQQDFQLTHHPNFNWLVDSTSHISDLGDGNLSGQLIPQLGHAALKFDVFANEGFKHSERETIVVHFDANLSNENCVSEFLATHGIMCLTLQDSHCFSIATVSQACNVRITTLWFNHSHKSLLVSSKYEIRISNFLSGQVSYC 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi03g1214 257 Gene3D Transferase(Phosphotransferase) domain 1 7 119 - -
Glsi03g1214 257 Pfam Protein tyrosine and serine/threonine kinase 13 99 IPR001245 GO:0004672|GO:0006468
Glsi03g1214 257 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 13 110 - -
Glsi03g1214 257 SUPERFAMILY Protein kinase-like (PK-like) 12 107 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi03g1214 Glsi-ChrGlsi03 74039979 74045219 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi03g1214 13 138 Receptor kinase-like Gene Family AT1G34210 59.589 1.66e-51 175
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Glsi03g1214 PK_Tyr_Ser-Thr 4.2e-06 CL0016