Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi03g1213 ATGGAGCCAGTGATTTCTTCTTTCATGGGCTCGTTTCTTCTTTTGGCAATTTTTGTGGTTGATTTGTTATTAAAGGTTTCTGGTAATGCAGAAGGTGATGCCCTGAATGCTTTGAAGAATAACATGGCTGATCCTAACAATGTTCTGCAAAATTGGGATCCAATCGAACTCAATCCATGCATGTGGTTTCGTGTTAGATGCAATAGTGATAATAGTGTCACCCGTATTGATCTCGGAGATGTAAACCTCTCGGGTGAACTAGTTCCACAACTTGGTCAGCTTCGAAATCTACAGTACTTGGAGCTCTATAGTAATAATATAAGTGGAAAAATCCCAAATGAGCTTGGAAATTTGATAAACTTGGTGAGCTTGGATCTTTACTTGAATGGATTAACTGGTCCCATCCCAGACACATTGGGCAACCTTAATAAACTACGTTTCCTGCGTCTTAACAATAACGGCTTGTCGGGAACAATTCCCAAGTCTTTGACTACTGTTGCTTCTCTTCTAGTCCTTGATCTCTCCAACAACCAGTTGGAAGGAGATATCCCGGTCAATGGTTTATTTTCATTAATTCCTACCATCAGTTTGCAAAATAATCCTGGATTAAAACAGCAAAAGTTCTCTCCACCTCCACCAATCTCTTCAATGCCACCAGCTCCTTCAGGTTCATTGTTGCATACGGCTCATGACCTAGCACGACTTGCAAATGACGATGATGCCATGTTGCTTGATTGGGTAAAAGGATTTCGGAGATACAAGAGGTTGGGAACACTGGTGGATGTTGATTTACAGGGAAATTATGATGAAGAGGAGGTAGAGCAGCTAACCCATTTGGCCTTACTATGCACACAAGGCTCCCCTATGGGAAGACCAAAAATGTCTGAGGTGGTTAGAATACTAGAAGGTGATGATTTGGCTGATAGATGGGAGCAGTATTGCCAAAGAGAAGAGACTCTCGAGTATGATTTCAACAATATCCATCATCCCACTTCTGATTGGATAATAGACTCAACTTCAAGTCTCCAACCAGAGGAATTATCAGAGCGAAATAGTCCTGCAATTGCACTTGCTTATAAGCAAAGAAAGAAACCACAAGATGATTTCCTTGATGTTCCTGCTGTACGAGGTACAATTGGGCATATAGCACCAGAGTACCTTTCAACTGGAAAGGCTTCAGAGAAGACTGATGTTTTTGGATATGGTGTGATGCTTCTTGAACTAATAACTGGACAGAGAGCCTTTGACTTGGCACGACTTGCAAATGACGATGATGTCATGTTGCTTGATTGGGTGAAAGGACTTCTTAAAGACAAGAGGTTGGAAACACTGGTGGATGCTGATTTACGGGGAAATTACAATGAAGAGGAGGTAGAGCGGCTAATCCAATTGGCTTTACTATGCACACAAGACCTCCCTTCGGAAAGACCCAAGATGTCAGAGGTGATCATAATGCTACAAGGTGTTGGTTTGGCTGAAAAGTGGGAGCAATATTGCCAGAAAGAGGAGACTCGAGGGCATGATTTCAACAACACCCATCATCCCAATTCTGATTGGGTAGTAGACTCAGCTTCAAGTATCGAAACAGAGGAACTATCAGGTCCTGATTGGGTAGTAGACTCAGCTTCAAGTATCGAAACAGAGGAACTATCAGTATCTAAAGAATGGTATGCATCCAACAGGTTACTCATATTAAGTATAAGATGGTGGATTATTTTCATATTCTTGACTTCATGTACATTGGCTAATGCGGCAGCAGCAAGGAATGAACTGCCTCGAGTTCCAACTTGA 1791 0.4188 MEPVISSFMGSFLLLAIFVVDLLLKVSGNAEGDALNALKNNMADPNNVLQNWDPIELNPCMWFRVRCNSDNSVTRIDLGDVNLSGELVPQLGQLRNLQYLELYSNNISGKIPNELGNLINLVSLDLYLNGLTGPIPDTLGNLNKLRFLRLNNNGLSGTIPKSLTTVASLLVLDLSNNQLEGDIPVNGLFSLIPTISLQNNPGLKQQKFSPPPPISSMPPAPSGSLLHTAHDLARLANDDDAMLLDWVKGFRRYKRLGTLVDVDLQGNYDEEEVEQLTHLALLCTQGSPMGRPKMSEVVRILEGDDLADRWEQYCQREETLEYDFNNIHHPTSDWIIDSTSSLQPEELSERNSPAIALAYKQRKKPQDDFLDVPAVRGTIGHIAPEYLSTGKASEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKDKRLETLVDADLRGNYNEEEVERLIQLALLCTQDLPSERPKMSEVIIMLQGVGLAEKWEQYCQKEETRGHDFNNTHHPNSDWVVDSASSIETEELSGPDWVVDSASSIETEELSVSKEWYASNRLLILSIRWWIIFIFLTSCTLANAAAARNELPRVPT 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi03g1213 596 SUPERFAMILY Protein kinase-like (PK-like) 217 312 IPR011009 -
Glsi03g1213 596 SUPERFAMILY L domain-like 31 200 - -
Glsi03g1213 596 Gene3D Ribonuclease Inhibitor 28 210 IPR032675 -
Glsi03g1213 596 FunFam Somatic embryogenesis receptor kinase 1 27 214 - -
Glsi03g1213 596 Pfam Protein tyrosine and serine/threonine kinase 378 483 IPR001245 GO:0004672|GO:0006468
Glsi03g1213 596 Pfam Leucine rich repeat N-terminal domain 29 68 IPR013210 -
Glsi03g1213 596 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 242 312 - -
Glsi03g1213 596 SUPERFAMILY Protein kinase-like (PK-like) 374 491 IPR011009 -
Glsi03g1213 596 Gene3D Transferase(Phosphotransferase) domain 1 225 321 - -
Glsi03g1213 596 Gene3D Transferase(Phosphotransferase) domain 1 348 506 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi03g1213 Glsi-ChrGlsi03 73988895 74007886 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi03g1213 374 535 Receptor kinase-like Gene Family AT1G34210 72.840 1.11e-71 240
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Glsi03g1213 PK_Tyr_Ser-Thr 4.9e-08 CL0016