Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi03g1210 ATGGTGGGGACAACGACAGTCACTGGCGTCCAAGCCGGCGCTTTGGCGTTGCTTTCTTTACTGGATTTGGAGGTCAACGAGCAATATCCTTCTGAGATTCCAGCTCCAGATTCCAAAGGACAGAACCAGTTGCATAGGCATGATTGTGAAGCTCGTGAAGTAGTAGTTAATGAAGATAAAAAATATGGAGCGAGTGATTTCGTCCTTCATGGGTTGGTGTCTTCTTTGGACAATTTTAGCGTTTGTTTTCGTGCTAAAGGTGACGCCCTATATGCTTTGAAGAATAATTTAGCTGATCCTAACAATGTTCTTCAAAATTGGGATCCGACCGAAGTCAATCACTGTATGTGGTTTCATGTCAGGTGCAATAGTGATAATAGTGTCATCCGCTTAGATCTTGGAGGCGAAAACCTGTCGGGTGAACTGGTTCCACAACTTGGTCAACTCTCAAATTTGCAGCACTTGTTACTCTATAGTAATAATATAAGTGGAAAAATCCCATATGAGTTTGGAAAGTTGACAAATTTGGTGAGCTTGGATGTTTACATGAACAGATTAACAGCTATGGTCACTGTGGAATCTAGTGATATCTCGAACAACCATTTAAAAGGAGATATCCCAGTCAATGGTTCGTTTTCATTATTTCCGTCCACAAGGTTTGTGCAAATAAAGTTGTTTACTTCCATGGCTATTGTTGTGGATTTGAGGGATGACATGTCAAAATTTTTACTATGCATTCTACTTTACAGTTTTGAAAATAATCCTGGATTAAAACAACGAAAGTTCTCTCCACTTCCACCAATTCGTCAAATGCCATCGGCTCCCTCAGGAGCTGCAAGGGCCCTTGCTTATTTGCATGAACATTGTGACCCCAAGATTATTCATCGTGATGTCAAAGCTTCAAATATAATGTTGGATGAGGAATTTGAAGCCGTTGTTGGAGACTTTGTCGATTTAAAGGTGAAAAGACGAGTCAAAGATAAGAGGTGGGAAACACTGGCGGATATTGATTTACAGGGAAATTATGATGAAGAGGAGGTAAAGCATCTAATCCAAGTGGCCTTACTATGCACACAAGACTCCCCTACAGGAAGGCCGAAAATGTCAGAGGTGGTCAGAATGCTAGAAGGTTATGATTTGGCCGAAAAGTGGGAGCAATGGCAAAATGAGGTGATGTCCCAGCAAGATTTCTATCACACGGATCACCTGTATGGAAATTGGATGGTAGACTTACCATCAGATTCCTCAGGAGATGGAGATGATCCTTGA 1269 0.4145 MVGTTTVTGVQAGALALLSLLDLEVNEQYPSEIPAPDSKGQNQLHRHDCEAREVVVNEDKKYGASDFVLHGLVSSLDNFSVCFRAKGDALYALKNNLADPNNVLQNWDPTEVNHCMWFHVRCNSDNSVIRLDLGGENLSGELVPQLGQLSNLQHLLLYSNNISGKIPYEFGKLTNLVSLDVYMNRLTAMVTVESSDISNNHLKGDIPVNGSFSLFPSTRFVQIKLFTSMAIVVDLRDDMSKFLLCILLYSFENNPGLKQRKFSPLPPIRQMPSAPSGAARALAYLHEHCDPKIIHRDVKASNIMLDEEFEAVVGDFVDLKVKRRVKDKRWETLADIDLQGNYDEEEVKHLIQVALLCTQDSPTGRPKMSEVVRMLEGYDLAEKWEQWQNEVMSQQDFYHTDHLYGNWMVDLPSDSSGDGDDP 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi03g1210 422 Gene3D Ribonuclease Inhibitor 84 230 IPR032675 -
Glsi03g1210 422 Gene3D Transferase(Phosphotransferase) domain 1 257 320 - -
Glsi03g1210 422 SUPERFAMILY L domain-like 81 218 - -
Glsi03g1210 422 Gene3D Transferase(Phosphotransferase) domain 1 321 395 - -
Glsi03g1210 422 ProSitePatterns Serine/Threonine protein kinases active-site signature. 293 305 IPR008271 GO:0004672|GO:0006468
Glsi03g1210 422 SUPERFAMILY Protein kinase-like (PK-like) 244 376 IPR011009 -
Glsi03g1210 422 FunFam Leucine-rich repeat receptor-like kinase 85 195 - -
Glsi03g1210 422 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 79 207 - -
Glsi03g1210 422 Pfam Leucine rich repeat N-terminal domain 87 123 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi03g1210 Glsi-ChrGlsi03 73922090 73931899 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi03g1210 321 410 Receptor kinase-like Gene Family AT1G34210 56.667 1.49e-24 104
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Glsi03g1210 LRRNT_2 3.7e-08 No_clan