Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi03g1204 ATGGACTACAAAGATACTCATGTTACCACAGCTGTCTGTGGTACGATTGGGCACATAGCACCAGAGTACCTCTCAACTGGAAAGTCCTCGGAGAAGACTGACGTTTTTGGATATGGGGTGATGCTTCTTGAACTGATAACTGGACAGAGAGCTTTTGACCTAGCACGACTTGCCAGAGATGATGATGTCATGTTGCTTGATTGGGTGAAAGGACTTCTCAAAGACAAGAAGCTGGAAACACTAGTGGACGCTAATTTACGGAGAAATTATATTGAAGAGGAGGTTGAGCAGCTAATCCGAGTGGCCTTACTATGTACACTAAGCTCCCCTACAGATAGACCCAAAATGTCAGAGGTGGTCAGAATGCTAGAAGGTGATGGTTTGGCCGAAAAGTGGGAGCAATGGCAAAAAGAGGAGATGTTCCGGCAAGATTATAATTACACCCATTATCCCCATGCTAATTTGTTAGTAGACTCAACTTCAAATATCTCAGCAGAGGAACTATCCGGCCCTCGATAA 519 0.4451 MDYKDTHVTTAVCGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLARDDDVMLLDWVKGLLKDKKLETLVDANLRRNYIEEEVEQLIRVALLCTLSSPTDRPKMSEVVRMLEGDGLAEKWEQWQKEEMFRQDYNYTHYPHANLLVDSTSNISAEELSGPR 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi03g1204 172 SUPERFAMILY Protein kinase-like (PK-like) 4 147 IPR011009 -
Glsi03g1204 172 ProSiteProfiles Protein kinase domain profile. 1 133 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi03g1204 172 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 2 134 - -
Glsi03g1204 172 Gene3D Transferase(Phosphotransferase) domain 1 1 143 - -
Glsi03g1204 172 Pfam Protein kinase domain 7 121 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi03g1204 Glsi-ChrGlsi03 73807359 73808733 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi03g1204 1 172 Receptor kinase-like Gene Family AT4G33430 81.714 1.11e-94 286
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Glsi03g1204 Pkinase 7.1e-10 CL0016