Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi03g1191 ATGAAGCAAACCTCTATCCCATCTTGCTCAAGTGGAGGTTCTGGTAAAGGTTCTGATACTCAAGTCAAAGAAGTCATTAGGGAAAGAATAATTCTCGAGAATTGCAGGATGAATTCAGAGACGAGTTATGGTGGAGTTGCTCGTGCTTCAGATGGTATTTTCTACAACAAAATCATCTTTTTAGTGCTCTCCATTTTGCTTGCTTTGGCTAGTCCTATATATGGCCATGGCACTCGCGTAGGCTTCTACTCAAGCTCCTGCCCTCGAGCTGAGTCTATTGTTAGTTCCACAGTTCAAACTCATTTTAGGTATGACCCTTCTGTGGCTGCTGGGTTGCTCAGAATGCACTTCCATGACTGCTTTGTGCAAGGTTGCGACGCTTCCATTCTCGTTGCTGGCACTGCGACCGAGAGAACTGCTCCACCGAACCTATCGTTGAGAGGCTTTGAGGTCATTGATGATGCCAAGACGCAGCTTGAGGCGGCATGCCCTGGTGTTGTGTCTTGTGCTGATATCCTTGCCCTTGCTGCTCGTGATTCCGTTGTTTTGAGTGGTGGGCTAAGTTGGAAAGTGCCCACCGGACGCAGAGATGGGCGAGTATCACAGGCTTCGGATGCGAATAATTTGCCAGGTCCCACTGATTCCGTTGATATACAAAAACAGAAATTTGCCGCAAAGGGCCTCAACACTCGAGACCTTGTCACTCTTGTTGGTGGGCATACCATTGGTACTGCAGCTTGCCAAACTTTCAGTAAGAGACTATACAACTTCACGGGAAATGGTCCTGACCCTTCCATAGACCCTGCGTTCCTACCCCAGCTACAGGCACTCTGTCCGCAAAACACCGGCGGCTCGAACCGGGTTGCGCTGGATTTCGGTAGCCAAAAACAGTTCGATACATCATACTATGGTAATCTGAGGAAGGGCCATGGAATTCTGCAGTCTGACCAAGCACTGTGGAGCGATGCTTCCACAAAGAGGCTTGTTCAGAGGTACCTGGGGTTAAGAGGCTTGCGAGGGTTGACATTTAGCGTGAAGTTTGGAGAGTCTATGGTGAAGATGAGCAATATTGGGGTGAAGATTGGTTCTGACGGTGAAATTCGCACAAAATGTTCTGCCATTAATTAG 1128 0.4832 MKQTSIPSCSSGGSGKGSDTQVKEVIRERIILENCRMNSETSYGGVARASDGIFYNKIIFLVLSILLALASPIYGHGTRVGFYSSSCPRAESIVSSTVQTHFRYDPSVAAGLLRMHFHDCFVQGCDASILVAGTATERTAPPNLSLRGFEVIDDAKTQLEAACPGVVSCADILALAARDSVVLSGGLSWKVPTGRRDGRVSQASDANNLPGPTDSVDIQKQKFAAKGLNTRDLVTLVGGHTIGTAACQTFSKRLYNFTGNGPDPSIDPAFLPQLQALCPQNTGGSNRVALDFGSQKQFDTSYYGNLRKGHGILQSDQALWSDASTKRLVQRYLGLRGLRGLTFSVKFGESMVKMSNIGVKIGSDGEIRTKCSAIN 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi03g1191 375 MobiDBLite consensus disorder prediction 1 20 - -
Glsi03g1191 375 ProSitePatterns Peroxidases active site signature. 109 120 IPR019794 GO:0004601
Glsi03g1191 375 MobiDBLite consensus disorder prediction 194 215 - -
Glsi03g1191 375 ProSiteProfiles Plant heme peroxidase family profile. 77 375 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi03g1191 375 PANTHER PEROXIDASE 25-RELATED 65 363 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi03g1191 375 CDD secretory_peroxidase 79 374 IPR033905 GO:0004601|GO:0042744
Glsi03g1191 375 MobiDBLite consensus disorder prediction 200 215 - -
Glsi03g1191 375 FunFam Peroxidase 210 354 - -
Glsi03g1191 375 ProSitePatterns Peroxidases proximal heme-ligand signature. 232 242 IPR019793 -
Glsi03g1191 375 FunFam Peroxidase 81 222 - -
Glsi03g1191 375 Gene3D - 81 375 - -
Glsi03g1191 375 Gene3D Peroxidase, domain 2 210 354 - -
Glsi03g1191 375 MobiDBLite consensus disorder prediction 1 18 - -
Glsi03g1191 375 SUPERFAMILY Heme-dependent peroxidases 79 375 IPR010255 GO:0004601|GO:0006979|GO:0020037
Glsi03g1191 375 PRINTS Haem peroxidase superfamily signature 291 306 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi03g1191 375 PRINTS Haem peroxidase superfamily signature 167 184 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi03g1191 375 PRINTS Haem peroxidase superfamily signature 185 197 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi03g1191 375 PRINTS Haem peroxidase superfamily signature 109 123 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi03g1191 375 PRINTS Haem peroxidase superfamily signature 232 247 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi03g1191 375 Pfam Peroxidase 95 332 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi03g1191 375 PRINTS Plant peroxidase signature 87 106 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi03g1191 375 PRINTS Plant peroxidase signature 231 243 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi03g1191 375 PRINTS Plant peroxidase signature 147 160 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi03g1191 375 PRINTS Plant peroxidase signature 289 304 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi03g1191 375 PRINTS Plant peroxidase signature 111 131 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi03g1191 375 PRINTS Plant peroxidase signature 166 176 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi03g1191 375 PRINTS Plant peroxidase signature 305 322 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi03g1191 375 PRINTS Plant peroxidase signature 349 362 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi03g1191 375 PRINTS Plant peroxidase signature 185 200 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi03g1191 Glsi-ChrGlsi03 73669192 73674856 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi03g1191 54 375 Peroxidase AT5G64120 63.665 9.91e-148 419