LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Glsi03g1173	ATGGCTGAGGAGGGGGATTTAGAGAGAGGGGAAATCAATGGTGGGTTGTCGATGGACTCCACCGAATCCAGGTGGGTTTTCCAGGAGGACGAAGATGATTCGGAGATAGAGGACGATGAAGGTTATTCGCGGCACCAGGCCATGTTGGACTCGGAGGATGAGGAAAGCGGCGAGCAGAGACTGATTCGAACTGGCCCGCGAATAGATTCGTTCGATGTTGATGCTCTTGAGGTCCCGGGTGCTCAGAGAAATGACTATGAGGTGGATGTTAGTGTGGGAAAGAAAATAGCATTGGCTTTTCAGACCCTTGGTGTTGTATTTGGTGATGTTGGGACTAGTCCATTGTATACCTTCAGTGTTATGTTTAGAAAGGCCCCTATTAATGGAAATGAAGACATTCTTGGAGCATTATCTCTTGTACTGTACACATTAATCTTGATTTCCCTAGTGAAGTATGTCCTGGTTGTTTTGTGGGCCAATGATGATGGTGAAGGTGGTACTTTTGCCTTGTACTCCTTGATTTGTCGTCATGCTAAGGTGAGTCTTCTCCCCAATCAGTTGCCATCAGACGCCCGCATATCAAGCTTTAGGCTAAAGGTTCCATCCCCTGAGCTTGAAAGGTCATTAAAAATCAAGGAAAGACTGGAGGCTTCACTGACTCTGAAGAAGATTTTACTGGTATTAGTGCTTGCTGGTACTTCTATGGTGATAGCTAATGGGGTTGTTACACCAGCAATGTCAGTACTGTCATCAGTTGGTGGTTTAAAAGTTGGGGTAGATCCAATCGAACAAAATGAAGTGGTGATGATATCTGTCACCTGCCTCATCATCTTATTCAGTGTACAGAAGTATGGAACTAGTAAAGTGGGACTTGCTGTAGGACCTTCTTTGTTCATATGGTTTTGTTCTCTTGCGGGCATTGGGATATATAATCTCATTAAATATGACAGCAGTGTCTTGAGGGCATTTAATCCTCTTCATATTTATTACTTCTTCAAGAGGAATTCAACTAAAGCATGGTATTCTCTTGGGGGATGTCTTCTCTGTGCAACTGGTTCTGAGGCCATGTTTGCAGATCTTTGCTACTTCTCTGTACGATCAGTTCAGCTTTCTTTTGTCTGTCTTGTTTTGCCATGCCTAGTATTGGGTTACTTGGGTCAAGCTGCATACCTTATGGAAAACCATGCTGATGCTGGTCAAGCCTTTTTTTCTTCTGTTCCAAGTGGTGCGTTCTGGCCAGTTTTGCTCATTGCTAACATTGCTGCACTAATTGCAAGTCGTGCTATGACAACAGCCACATTTTCATGTATAAAACAATCAACTGCCCTTGGTTGTTTCCCTCGTCTGAAAATCATTCATACCTCTCGGAAATTTATGGGCCAGATCTATATCCCTGTCATAAACTGGTTTCTTTTGGCTGTTTCTCTGGTGTTTGTATGCACTATATCCAGCATTGATGAGATTGGGAATGCTTATGGCATTGCTGAGATTGGGGTGATGATGATGACCACTATTTTAGTAACCCTTGTTATGCTACTTATATGGCAGATACACATCATCATAGTGCTGTGTTTTGTGGTAGTCTTCTTGGGATTGGAATTGACTTTCTTTTCATCAGTTTTGGGGAGTGTGACAGATGGAAGTTGGATTATATTGGTCTTTGCCATAATAATGTTTCTTATAATGTATATATGGAATTATGGAAGCAAGCTCAAGTATGAAACTGAAGTCAAGCAGAAGCTGTCAATGGATTTGATGCGAGAATTAGGTTGCAATCTTGGGACAATACGAGCTCCTGGGATTGGTTTGCTCTACAATGAGTTGGTTAAAGGAATTCCAGCAATTTTTGGCCATTTTCTGACCACACTTCCAGCAATTCACTCCATGATTATATTTGTGTGTATCAAGTATGTTCCAGTTCCTGTGGTGCCTCAAAGTGAAAGGTTCCTTTTCCGGCGAGTCTGCCCAAAAAGCTATCATATATTTCGTTGTATTGCTAGGTATGGTTACAAAGATGTTCGCAAAGAAAATCACCAGGCTTTTGAGCAGTTGCTGATTGAGAGCCTAGAGAAATTTATACGTCGAGAAGCGCAAGAGCGGTCACTGGAAAGTGATGGAGATGATGATAAAGATTCAGAGAATGGGTATTCTGCTTCTAGGCTTCTCATAGCTCCCAATGGGAGCGTTTACTCCCTTGGTGTTCCCCTTCTGGCTGATTACCACGATACACGCAACAATTCCATTTCGGAAGCAAGCACATCAGAGGTGGGGAATCCAGCGTCCCCCGATCCCCCAGTGTTTGATGCAGAGCAGAGTCTTGAAAGGGAGTTGTATTTTATACGAAAGGCTAAAGAATCTGGAGTTGTTTATCTTCTTGGTCATGGGGATATAAGGGCAAGGAAGGATTCCTGGTTTATAAAGAAGCTAGTTATTAACTATTTTTATGCTTTCTTGAGAAAGAACTGCAGGAGGGGGATCGCAAATTTAAGTGTTCCCCACTCACATCTGATGCAGGTCGGCATGACATACATGGTTTGA	2538	0.4279	MAEEGDLERGEINGGLSMDSTESRWVFQEDEDDSEIEDDEGYSRHQAMLDSEDEESGEQRLIRTGPRIDSFDVDALEVPGAQRNDYEVDVSVGKKIALAFQTLGVVFGDVGTSPLYTFSVMFRKAPINGNEDILGALSLVLYTLILISLVKYVLVVLWANDDGEGGTFALYSLICRHAKVSLLPNQLPSDARISSFRLKVPSPELERSLKIKERLEASLTLKKILLVLVLAGTSMVIANGVVTPAMSVLSSVGGLKVGVDPIEQNEVVMISVTCLIILFSVQKYGTSKVGLAVGPSLFIWFCSLAGIGIYNLIKYDSSVLRAFNPLHIYYFFKRNSTKAWYSLGGCLLCATGSEAMFADLCYFSVRSVQLSFVCLVLPCLVLGYLGQAAYLMENHADAGQAFFSSVPSGAFWPVLLIANIAALIASRAMTTATFSCIKQSTALGCFPRLKIIHTSRKFMGQIYIPVINWFLLAVSLVFVCTISSIDEIGNAYGIAEIGVMMMTTILVTLVMLLIWQIHIIIVLCFVVVFLGLELTFFSSVLGSVTDGSWIILVFAIIMFLIMYIWNYGSKLKYETEVKQKLSMDLMRELGCNLGTIRAPGIGLLYNELVKGIPAIFGHFLTTLPAIHSMIIFVCIKYVPVPVVPQSERFLFRRVCPKSYHIFRCIARYGYKDVRKENHQAFEQLLIESLEKFIRREAQERSLESDGDDDKDSENGYSASRLLIAPNGSVYSLGVPLLADYHDTRNNSISEASTSEVGNPASPDPPVFDAEQSLERELYFIRKAKESGVVYLLGHGDIRARKDSWFIKKLVINYFYAFLRKNCRRGIANLSVPHSHLMQVGMTYMV	845

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Glsi03g1173	845	PANTHER	OSMOTIC STRESS POTASSIUM TRANSPORTER	94	843	IPR003855	GO:0015079\|GO:0016020\|GO:0071805
	Glsi03g1173	845	MobiDBLite	consensus disorder prediction	39	60	-	-
	Glsi03g1173	845	Pfam	K+ potassium transporter	99	672	IPR003855	GO:0015079\|GO:0016020\|GO:0071805
	Glsi03g1173	845	MobiDBLite	consensus disorder prediction	1	60	-	-
	Glsi03g1173	845	NCBIfam	potassium uptake protein	98	845	IPR003855	GO:0015079\|GO:0016020\|GO:0071805

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Glsi03g1173	Glsi-ChrGlsi03	73290685	73306314	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Glsi03g1173	1	845	Inorganic Solute Cotransporters	AT5G09400	79.954	0.0	1338