Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi03g1168 ATGTTAGGATGCACTCAACGTTATGACTGTGCAATAACAGAACTATGGTTTCAGTGTGCAGACGCTAGTGACACCATGCTTTGTATCAATGCTCGTGGTGGTGGGTTGGGGCTGCTGGACCACATGGGTACCATATATAACTTGGCTAATGATGCTTTGACCCTTCAGTGTTTTTCTTTTCTGGCATTTGCAGTTCTCTGTGGACCCTCTGGAAAAGGTGAGGTGGGGCTGCTGAATTATATGGATAATCTCTGTTGCTTCAACTCTGTCTCTCAGGTGGTTGGCGGACGTTCGACATGTAGCTCTGGCAAGGGCAGGAGCCATCAGGGTCCAGTCAAGTATGGCTTTAGCCTAGTTAAAGGGAAAGCAAACCACCCAATGGAGGACTATCATGTAGCAAAATTTGTCCAGTTCAGAGGACAAGAGCTTGGACTTTTTGCTATATATGATGGGCACCTGGGAGACAGTGTGCCGGCCTATCTACAAAAGAATCTATTTTCTAATATCTTAAAAGATGAGGACTTCTGGACTGATCCAAACAGGTCCATTGTAAAAGCCTATGAGACAACAGATCAGGCAATTCTTTCTCAGAGTTCTGATTTGGGACGAGGCGGATCAACTGCTGTGACTGCAATCCTTCTAAATAATCAAAAGTTATGGATAGCTAATGTTGGAGATTCACGAGCCGTTTTGTCGAAGAGTGGGTTGGCCATACAGATGAGTACAGATCATGAGCCCAATACTGAGAGGGACAGCATTGAGGACAGAGGCGGCTTTGTCTCAAACATGCCAGGAGATGTTGCAAGAGTGAATGGGCAGCTTGCAGTTTCCCGAGCATTCGGAGACAAAAACCTCAAATCGCACTTGCGATCCGATCCTGACATACAACAGTCTGACATTGACCCAAATACTGAGCTTTTGGTACTTGCAAGTGATGGTCTATGGAAGGTAATGGCAAATCAAGAGGCAGTTGATATTGCTAGAAGGATAAAAGATCCACAAAGGGCAGCCAAACAGCTAGTTGCTGAGGCATTGAACAGAGACAGCAAGGATGATATTTCTTGCATTGTAGTTCGTTTCAAGGGATGA 1089 0.4527 MLGCTQRYDCAITELWFQCADASDTMLCINARGGGLGLLDHMGTIYNLANDALTLQCFSFLAFAVLCGPSGKGEVGLLNYMDNLCCFNSVSQVVGGRSTCSSGKGRSHQGPVKYGFSLVKGKANHPMEDYHVAKFVQFRGQELGLFAIYDGHLGDSVPAYLQKNLFSNILKDEDFWTDPNRSIVKAYETTDQAILSQSSDLGRGGSTAVTAILLNNQKLWIANVGDSRAVLSKSGLAIQMSTDHEPNTERDSIEDRGGFVSNMPGDVARVNGQLAVSRAFGDKNLKSHLRSDPDIQQSDIDPNTELLVLASDGLWKVMANQEAVDIARRIKDPQRAAKQLVAEALNRDSKDDISCIVVRFKG 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi03g1168 362 ProSiteProfiles PPM-type phosphatase domain profile. 113 360 IPR001932 -
Glsi03g1168 362 CDD PP2Cc 112 360 IPR001932 -
Glsi03g1168 362 SUPERFAMILY PP2C-like 108 361 IPR036457 -
Glsi03g1168 362 SMART PP2C_4 109 358 IPR001932 -
Glsi03g1168 362 PANTHER PROTEIN PHOSPHATASE 105 360 IPR015655 GO:0004722|GO:0006470
Glsi03g1168 362 Gene3D - 97 362 IPR036457 -
Glsi03g1168 362 SMART PP2C_SIG_2 124 360 IPR001932 -
Glsi03g1168 362 FunFam Probable protein phosphatase 2C 39 103 361 - -
Glsi03g1168 362 Pfam Protein phosphatase 2C 122 353 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi03g1168 Glsi-ChrGlsi03 73221128 73232820 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi03g1168 81 361 PP2C-type Phosphatase Gene Family AT1G22280 73.519 2.11e-153 431