Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi03g1156 ATGGCTTCAAGCTCTTGTACTGCACCTTCCCTTCGCTACCTTCCTCATACACACAAGCTACGATTCCAAGTGGCTTGTTCCCCTTATCCACCTATGGCTAGTAGTGGTCTAGAGATTGAGACCGCAACGTTAGATGTGGAAGCCTTAAGTGGTTTCAGAAAGAACATTAATGGAGGAGAAACTCACAGAGAAGAGGTTGGTATCTGTTTGACATGGAAGGATCTGTGGGTGACTGGTTATAGTGGGAAGATTGGAAGCAGAGCCATCCTTCAGGGTGTAACTGGTTATGCCAAGCCAGGGCAGCTCTTGGCCGTAATGGGCCCCTCTGGATGTGGCAAGTCTACACTTCTTGATGCATTAGCGGGTAAAAATTTTGAACCTGGTTTGGCCTATGTGACACAAGATGATATTTTATTGACAACCTTAACTGTAAGAGAAGCAGTGCACTATTCAGCTCAGCTCCAACTACCAAACACAATGTCAAAGGAAGAGAAAAAGGAGAGAGCAGATTTGACAATAAGAAAAATGGGTCTGCAAGATGCGATTAACACAAGAATTGGAGGGGCGGATTGCAAGGGCATAAGTGGGGGCCAAAAGAGGAGAGTGAGCATTTGCATTGAGATCCTAACCCGCCCTAGTCTTCTCTTCCTCGATGAACCAACTAGTGGACTTGATAGTGCAGCTTCATACTATGTTATGAGCAAAATTGCAAGCCTTGAACAGAAGGATGACGGGATTCAGAGAACTATTATTGCTTCAATCCACCAACCTAGTAGTGAAGTTTTCCAACTTTTTCATAATCTTTGTCTTCTGTCTGCTGGTAGAACTGTGTACTTTGGACCTGCTTCTGCTGCAAATGAGGTATTTCAACGAGAAAGGCTAAACGGGCATTATGGAGTGACTGCATTTGTGATAGGAAACAGCTTTTCTTCAATCCCATACTTATTACTATGTACCCTAATTCCTGGGGCCTTAGCCTATTACATGCCACGTCTTCACAAAGGCCTAGACCACTTCCTCTACTTCTCTTCTGTTCTATTTTCCTGCCTAATGCTAGTGGAGAGTCTCATGATGATAGTAGCCAGCATCGTCCCAAACTTTCTGATGGGAATAATAACTGGAGCTGGAATCCAGGGCATCATGATCCTAGCAGGAGGCTTCTTTAGATTGCCTAACGATCTTCCCAGAATTTTCTGGAAATACCCTTTGCACTACGTTGCTTTTCATAGATATGCCTACCAAGGAATGTTCAAGAACGAGTTTAAAGGTCTGAGTTTTGATAACGATCATGTTAGCGGGGAAGAGATTTTGAGAAGGCAATGGCAAGTTGATATGAGCTATTCAAAGTGGGTTGATCTTGTTGTCTTGCTGGGGATGATTGTTCTGTACAGACTTTTGTTCTTGGTTATCATCAAGGCTAGTGAGAAGTTGAAGCCCATGATTGCTTCTTTGCTTTCAGGGCCTCCAAAAAGATCAATTGTGCAGGTCATGGAGAATCCCAATGCTACTCCATTACATGGAGAGGCTGTATAA 1533 0.4371 MASSSCTAPSLRYLPHTHKLRFQVACSPYPPMASSGLEIETATLDVEALSGFRKNINGGETHREEVGICLTWKDLWVTGYSGKIGSRAILQGVTGYAKPGQLLAVMGPSGCGKSTLLDALAGKNFEPGLAYVTQDDILLTTLTVREAVHYSAQLQLPNTMSKEEKKERADLTIRKMGLQDAINTRIGGADCKGISGGQKRRVSICIEILTRPSLLFLDEPTSGLDSAASYYVMSKIASLEQKDDGIQRTIIASIHQPSSEVFQLFHNLCLLSAGRTVYFGPASAANEVFQRERLNGHYGVTAFVIGNSFSSIPYLLLCTLIPGALAYYMPRLHKGLDHFLYFSSVLFSCLMLVESLMMIVASIVPNFLMGIITGAGIQGIMILAGGFFRLPNDLPRIFWKYPLHYVAFHRYAYQGMFKNEFKGLSFDNDHVSGEEILRRQWQVDMSYSKWVDLVVLLGMIVLYRLLFLVIIKASEKLKPMIASLLSGPPKRSIVQVMENPNATPLHGEAV 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi03g1156 510 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 62 289 - -
Glsi03g1156 510 Pfam ABC-2 type transporter 285 421 IPR013525 GO:0016020|GO:0140359
Glsi03g1156 510 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 70 298 IPR003439 GO:0005524
Glsi03g1156 510 SMART AAA_5 99 270 IPR003593 GO:0016887
Glsi03g1156 510 Gene3D - 73 294 IPR027417 -
Glsi03g1156 510 ProSitePatterns ABC transporters family signature. 194 208 IPR017871 GO:0005524|GO:0016887
Glsi03g1156 510 Pfam ABC transporter 90 222 IPR003439 GO:0005524
Glsi03g1156 510 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 76 285 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi03g1156 Glsi-ChrGlsi03 72969952 72975152 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi03g1156 89 283 Calmodulin-binding Proteins AT2G36910 25.806 2.06e-08 55.1