Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi03g1150 ATGAAGTTCAACATTGCAAATCCCACTACTGGATGCCAGAAGAAGCTGGAGATCGATGACGATCAGAAGCTACGAGCTTTTTGGGACAAAAGGATCTCACAAGAGGTTAATGGTGATGCTCTGGGTGAGGAATTCAAAGGCTATGTCTTCAAAATCACAGGTGGTTGTGACAAACAAGGATTTCCGATGAAGCAGGGAGTGCTGACCCCTGGTCGTGTTCGTCTCTTGCTCCACAGAGGAACTCCTTGTTTCCGTGGATATGGAAGGCGCAATGGAGAACGTAGGAGAAAGTCTGTTCGTGGGTGCATTGTGAGCCCAGATCTCTCAGTTTTGAACTTGGTAATTGTGAAGAAGGGTGAGAATGATTTGCCTGGTCTGACTGACATTGAAAAGCCAAGGATGAGAGGTCCAAAGAGGGCATCCAAAATCCGTAAGCTGTTCAACCTGTCCAAGGAGGATGACGTGAGGAAGTATGTCAACACTTATCGTCGAACCTTTACAACAAAATCTGGGAAAAAGGCGAGCAAGGCTCCAAAGATTCAAAGACTGGTCACTCCTTTAACACTCCAAAGAAAGCGGGCAAGGATTGCAGATAAGAAGAAGAGAATTGCCAAGGCAAAATCAGAAGCAGCTGAATACCAGAAACTCCTCGCCTCCAGGTTGAAGGAGCAGAGGGAACGCCGAAGCGAGAGTTTGGCAAAGAGGAGATCCAAGCTTTCTAGTGCTTCCAAGCCAGCTGTTGCTGCTGCATAG 753 0.4728 MKFNIANPTTGCQKKLEIDDDQKLRAFWDKRISQEVNGDALGEEFKGYVFKITGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGENDLPGLTDIEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKSGKKASKAPKIQRLVTPLTLQRKRARIADKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKRRSKLSSASKPAVAAA 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi03g1150 250 Coils Coil 189 216 - -
Glsi03g1150 250 MobiDBLite consensus disorder prediction 219 237 - -
Glsi03g1150 250 PIRSF RPS6e 1 250 IPR014401 GO:0003735|GO:0005840|GO:0006412
Glsi03g1150 250 SMART Ribosomal_S6e_2 1 128 IPR001377 GO:0003735|GO:0005840|GO:0006412
Glsi03g1150 250 MobiDBLite consensus disorder prediction 219 250 - -
Glsi03g1150 250 PANTHER 40S RIBOSOMAL PROTEIN S6 1 240 IPR001377 GO:0003735|GO:0005840|GO:0006412
Glsi03g1150 250 ProSitePatterns Ribosomal protein S6e signature. 52 63 IPR018282 GO:0003735|GO:0005840|GO:0006412
Glsi03g1150 250 Gene3D - 133 234 - -
Glsi03g1150 250 Pfam Ribosomal protein S6e 1 128 IPR001377 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi03g1150 Glsi-ChrGlsi03 72830909 72833768 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi03g1150 1 249 Cytoplasmic Ribosomal Protein Gene Family AT5G10360 71.888 2.99e-120 339