Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi03g1146 ATGCATAAGGTCAGATGCATAAGGTGTCTCGAGGTGCTAGGCCCTTATAATTGCGGTCTGATGCATAAGGTGTCTCGAGGTGCTAGGCCCCCTAATGGCTATGATGCCAATCTTGTTTTCCCATCACTAGTTGCCTCAGAGATGAGAAGGGATGGACATCTTCGTACATCAACGTTCAACCCGAACAATTTATATGCTGACTGTTTTAATTACATGAATGATGGCTATGTGGAAAGAATTCAAACAGCATGTTTAAGCATTACTGCCAACCTTGATATCAGCGACTTGGATGTTTCTAGATCCATTGGTGATTTATACCTTAAAAAGGCAGAATTTAACAAGGAACCTTTGTATGCTAAGTTTCGTCTCCGTGAACCTTTTAAAAGACCAATTTTGAGCTCTGAGCCATCAATTTCTGTTCATGAACTTCAGCAGCAAGATCAATTTCTCATATTTGCTTCTGATGGCCTGTGGGAGCACCTTAGCAATCAGGATGCAGTTGATATAGTTCAAAATCACCCACGCAGTCTCGAATTGGAGGTCCAGTTCAATATCGATGGATGTACCCTTTTGAAAGGTTTTTGCGAACTTTAA 594 0.4125 MHKVRCIRCLEVLGPYNCGLMHKVSRGARPPNGYDANLVFPSLVASEMRRDGHLRTSTFNPNNLYADCFNYMNDGYVERIQTACLSITANLDISDLDVSRSIGDLYLKKAEFNKEPLYAKFRLREPFKRPILSSEPSISVHELQQQDQFLIFASDGLWEHLSNQDAVDIVQNHPRSLELEVQFNIDGCTLLKGFCEL 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi03g1146 197 CDD PP2Cc 70 180 IPR001932 -
Glsi03g1146 197 Gene3D - 69 184 IPR036457 -
Glsi03g1146 197 Pfam Protein phosphatase 2C 78 173 IPR001932 -
Glsi03g1146 197 SUPERFAMILY PP2C-like 70 173 IPR036457 -
Glsi03g1146 197 PANTHER PROTEIN PHOSPHATASE 79 175 IPR015655 GO:0004722|GO:0006470
Glsi03g1146 197 ProSiteProfiles PPM-type phosphatase domain profile. 1 197 IPR001932 -
Glsi03g1146 197 SMART PP2C_4 11 193 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi03g1146 Glsi-ChrGlsi03 72799679 72806636 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi03g1146 96 175 PP2C-type Phosphatase Gene Family AT5G66080 81.250 7.72e-43 143