Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi03g1117 ATGAAACAAATTACAGCAGCAGATGGCCCTACTTTCCTTCATGAGAACTGCACGAGCAATGAAACTTTCAGTGCAAACAGCATCTTCCAATCAAACCTCAGGACCCTCCTCTCTTCCTTGACTTCCAACGCCACCGGCAATTCCGGATTCTACAACACCAACCTCGCCGCCGGAAACCACTCCGATGCAGTCTATGGCCTCTTTATGTGCCGAGGTGACGTTCCCCTTGATCTCTGTCGAGGATGCGTTTTGAACGCAACCCGAAGACTAGGTGGTCAAGGCTCAGACAGTTGCCGGTTTTCTAAAATAGCTATAATATGGTATGATGAGTGCATGGTTCGCTATTCCAACCGGAATTTCTTCTCCACCGTGGATACAAGACCCAGATTGGGTCTGTTGAACACCGCGAATGTCACCGACTCAATGAAACAAATATTCATGAGTCGACTGTACACCATCGTGAACGAAGTGGCAGACGAGACAGCGACAGGGGATAAGAAATATGCGACAGGGCAAAAGAACCTGTCTGCGTTTCAGACACTATACGCTCTAGCACAGTGCACACCGGACCTGTCGCCCTACGATTGCAGGAGTTGTTTAAGTATTGTGATTGCGGATATTTCATGGTGTTGTTCATACAAGATTGGAGGAAGAGTTCTATATCCCAGCTGTGGCTTCAGGTATGAAATATACCCCTTCATCTATAGAACGGCTTCCCTGGCACCAACCCCTACGCCAGCAGGACTTGTTCCGCCTACACCGCCTGCAAAACAGAAAGGAAGACAAAAGGGCCAATCCCCAAGGACTATTGTGGTGGTTGTCATAGTTTCCTTTGTTGTTGCGGTGGCCCTCTTTTGTTTCGCCTACTGTTTCTTGCGGAGTAAAAGGAGGAAGAGTTACAAGAGCGTTCTCAGAGAAAATTTTGGAGCTGAAAGCATCGTATTAGAGTCCTTGCAATTCAGTTTGGCCGCAATTGAAGTTGCTACAAATAATTTTTCAAGTGAAAACAAAATAGGGAAAGGTGGATTTGGAGAAGTTTACAAGGGCATTCTTTCTGATGCAAGACAAGTAGCTATAAAAAGACTCTCAAGAAGTTCTGGACAACGAGCAATAGAGTTCAAGAATGAGGTTTTATTAATAGCCAAGCTTCAACACAGAAACTTGGTAACGTTGTTAGGATTTTGCCTAGAAGGAGAAGAGAAAATTCTTATCTATGAATATGTTCCTAACAACAGCCTGGATTACTTTCTATTTGGTACTCAAAATAGAAGTGTATTAAATTGGCAAGAGCGATATCAAATTATAGGAGGAATTGCTCAAGGAATTCTTTATCTTCACAAGTATTCTCGTCTTAAAATAATACATCGTGATCTTAAACCTAGCAATATTTTATTAGATAATAATATGAATCCAAAAATATCAGATTTTGGCATGGCCAAAATGGTTGGTATTGATGAAGACCAAGGAAGCACGAATAGAGTTGTTGGAACATTCGGTTATATGTCTCCAGAATATGCAATGCTTGGACAATATTCTGAAAAATCAGATGTATTTAGTTTTGGAGTTATAATTATGGAAATTATTTCTGGAAAGAAGAATGCCAGTCGTTATGAATCACAATATGTTGACGGCCTCTTGAGTTATGTTTGGAAGAAATGGAAGGATGAAAAATGGTTAGAAATATTGGATTCAAATCTAAGCACACAAGTTGTTTCGCATAGTGAAGTGCTTAAATGCATACATATTGGTTTATTATGTGTTCAAAAAAACCCAGATGCTAGGCCTTCGATGGTTACAGTTGTTTCATATTTTAGCAACGATTCAGTTCAATTGCCGTTTCCTCAAGAACCAGCATTTTTCATGCACGGTCGAATGGAGCCACCAATCATTGGAGAAAAGACATCAGGATCTTCCAGCAATTCCAAACCATGCTCAATCAATCAAATGTCTATGAGTGGATTCTGTCCTCGCTAG 1974 0.4134 MKQITAADGPTFLHENCTSNETFSANSIFQSNLRTLLSSLTSNATGNSGFYNTNLAAGNHSDAVYGLFMCRGDVPLDLCRGCVLNATRRLGGQGSDSCRFSKIAIIWYDECMVRYSNRNFFSTVDTRPRLGLLNTANVTDSMKQIFMSRLYTIVNEVADETATGDKKYATGQKNLSAFQTLYALAQCTPDLSPYDCRSCLSIVIADISWCCSYKIGGRVLYPSCGFRYEIYPFIYRTASLAPTPTPAGLVPPTPPAKQKGRQKGQSPRTIVVVVIVSFVVAVALFCFAYCFLRSKRRKSYKSVLRENFGAESIVLESLQFSLAAIEVATNNFSSENKIGKGGFGEVYKGILSDARQVAIKRLSRSSGQRAIEFKNEVLLIAKLQHRNLVTLLGFCLEGEEKILIYEYVPNNSLDYFLFGTQNRSVLNWQERYQIIGGIAQGILYLHKYSRLKIIHRDLKPSNILLDNNMNPKISDFGMAKMVGIDEDQGSTNRVVGTFGYMSPEYAMLGQYSEKSDVFSFGVIIMEIISGKKNASRYESQYVDGLLSYVWKKWKDEKWLEILDSNLSTQVVSHSEVLKCIHIGLLCVQKNPDARPSMVTVVSYFSNDSVQLPFPQEPAFFMHGRMEPPIIGEKTSGSSSNSKPCSINQMSMSGFCPR 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi03g1117 657 CDD STKc_IRAK 338 604 - -
Glsi03g1117 657 FunFam Cysteine-rich receptor-like protein kinase 25 128 233 - -
Glsi03g1117 657 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 293 407 - -
Glsi03g1117 657 Gene3D Phosphorylase Kinase; domain 1 293 407 - -
Glsi03g1117 657 ProSiteProfiles Gnk2-homologous domain profile. 11 120 IPR002902 -
Glsi03g1117 657 ProSitePatterns Serine/Threonine protein kinases active-site signature. 453 465 IPR008271 GO:0004672|GO:0006468
Glsi03g1117 657 Gene3D Transferase(Phosphotransferase) domain 1 408 611 - -
Glsi03g1117 657 SMART serkin_6 332 604 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi03g1117 657 SUPERFAMILY Protein kinase-like (PK-like) 315 627 IPR011009 -
Glsi03g1117 657 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 10 652 - -
Glsi03g1117 657 Pfam Protein kinase domain 333 601 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi03g1117 657 MobiDBLite consensus disorder prediction 632 657 - -
Glsi03g1117 657 ProSitePatterns Protein kinases ATP-binding region signature. 338 360 IPR017441 GO:0005524
Glsi03g1117 657 Gene3D - 130 233 IPR038408 -
Glsi03g1117 657 Gene3D - 10 120 IPR038408 -
Glsi03g1117 657 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 10 119 - -
Glsi03g1117 657 ProSiteProfiles Gnk2-homologous domain profile. 126 233 IPR002902 -
Glsi03g1117 657 ProSiteProfiles Protein kinase domain profile. 332 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi03g1117 657 FunFam cysteine-rich receptor-like protein kinase 10 408 611 - -
Glsi03g1117 657 Pfam Salt stress response/antifungal 17 117 IPR002902 -
Glsi03g1117 657 Pfam Salt stress response/antifungal 143 230 IPR002902 -
Glsi03g1117 657 MobiDBLite consensus disorder prediction 630 657 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi03g1117 Glsi-ChrGlsi03 72225174 72230597 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi03g1117 5 657 Receptor kinase-like Gene Family AT4G05200 47.885 0.0 603
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Glsi03g1117 Pkinase 3.2e-48 CL0016