Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi03g1116 ATGGGAAGTGTTACTGAAGGAAAGCTGAAGTTTTGTATTGACAGAGGAGGCACATTCACTGATGTCTATGCAGAAATCCCGGGTCAGTCTGATGGGCGAGTGTTGAAACTCCTATCTGTTGACCCATTAAACTATGATGATGCACCAGTTGAAGGGATTCGAAGGATCCTTGAAGAGTTCACTGGGGGGAAAATTCCAAGAAATTCAAAGATACCCACTGAGAAGATAGAGTGGATAAGGATGGGAACAACTGTGGCAACAAATGCCCTTTTAGAACGAAAAGGGGAAAGGATTGCTGTGTGTGTGACTCAAGGCTTCCGAGATTTACTCCAGATTGGTAACCAGGCTCGCCCCAGCATATTTGACCTCACTGTATCAAAACCATCGAATCTTTATGAAGAGATTGTAGAGGTGGAAGAGAGAGTTCAGTTGGTCCAAGATAAGGAGGCAGAAGATCAGGTTACTTCATCATTGGTTAAAGGTATTTCAGGGGAGCTTGTTAGGATTGTGAAGCCTCTCAATGAAGAAGCACTGAAGCCTTTACTGAAAAAATTATTGGAGAAAGGAATTAGTTGTTTGGCTGTTGTATTGATGCATTCATACACTTATCCACAGCATGAACAAAAGGTAGAGAAGTTAGCCTTGAGTCTGGGATTCAGACATGTTTCCATTTCATCTGCTTTAACTCCGATGGTCCGGGCAGTTCCTCGTGGTCTAACAGCCAGTGTAGATGCTTATTTGACCCCAGTTATTAAAGAATACCTGTCAGGATTCATGTCTAAATTTGACGAGGGACTGGGGAAGTTAAATGTTTTGTTTATGCAATCAGATGGTGGGCTTGCACCAGAGAGTACCTTTTCAGGGCATAAAGCAATTTTGTCTGGACCTGCTGGTGGGGTTGTTGGTTACTCACAAACTCTTTTTGGACTTGAGACAGATAAACCCTTAATTGGATTTGATATGGGAGGTACATCTACAGATGTGAGCCGGTATGCTGGAAGTTATGAGCAAGTGTTGGAAACCCAGATTGCTGGTGCCATAATACAAGCACCTCAGCTAGACATAAATACTGTTGCTGCCGGTGGTGGTTCGAAGTTAAAGTTCCAATTTGGAGCTTTTCGAGTTGGACCAGAGTCAGTTGGGGCGCACCCAGGTCCTGTATGTTATCGGAAAGGTGGGGAGTTGGCAATTACTGATGCCAACCTAGTTTTAGGATATGTTATTCCTGATTATTTCCCATCCATCTTTGGGCCAAATGAAGATCAGCCTCTGGATGTCAAATCAACAAGAGAAGAATTTGAGAAGCTTGCTGAACAAATAAATGCTTACCGAAAGAACCAGGATCCATCTGCAAAATACATGACAGTGGAACAGATTGCACTTGGTTTTGTGAATGTCGCTAATGAGACAATGTGTCGTCCAATAAGACAGTTGACTGAAATGAAGGGCCATGAGACAAAGAACCATGCACTTGCTTGCTTTGGAGGTGCTGGACCTCAGCATGCTTGTGCTATAGCTAGATCTTTGGGTATGAAAGAAGTTCTGATTCACAAATTTTGTGGGATCTTAAGTGCCTATGGCATGGGATTGGCAAATGTTGTGGAAGAGGAACAGGAGCCATATTCTGCAGTCTACGGAGCTGAATCTACTATTGAGGTTACACAACGAGAAGCTATGTTACTGAGACAGGTAAAGCAGAAGTTGCAAAACCAAGGATTCAGAGAGGAAAGTATATCAATAGAGACTTATTTAAACTTGAGATATGAAGGTACAGACACTGCCATCATGGTCAAAAGACAAATAGCTGAAGATGGAAAACTATGTGACTATGCTACTGAGTTTGTGAAGCTCTTTCAGCAGGAATATGGCTTTAAACTCCTGAACCGAAAGATTATGATTTGTGATGTTAGAGTTCGTGGTATAGGAGTTACCAATATATTGAAGTCATTGGCCCTAGAACCTGCCTCTGGTAGTCCCAAGGTTGATGGCTACTATCAAGTTTACTTTGGAAATGGTTGGCAAGAAACACCTCTATATAAGCTTGAAAATTTGGGGTATGGCCATATCATGCTTGGCCCTGCAATCATAATGAATGGCAATAGCACTGTGATTGTAGAACCCAACTGCAGAGCCATTATAACCAAATATGGCAACATCAAGATTGAAATTGATTCTCCCTTGAGCAGTGTTAAAATATCGGATAAAGTTGCAGATGTTGTACAGCTCTCCATATTCAATCACAGATTTATGGGAATAGCTGAGCAGATGGGAAGAACTCTACAAAGAACTTCTATTTCAACAAATATCAAAGAACGGCTTGATTTCTCCTGTGCTCTCTTTGATCCTAGTGGGGGCCTAGTTGCAAATGCACCTCATGTCCCTGTGCATCTAGGAGCTATGTCTAGTACAGTTCGGTGGCAGCTCAACTACTGGGGTGACAACTTAAATGAAGGAGATGTTTTGGTCACTAATCATCCTTGTGCTGGAGGTAGCCATCTTCCTGATATAACTGTTGTTACACCAGTTTTCTACAACGGGAAGTTGGTGTTTTTTGTGGCAAACAGAGGGCATCATGCAGAAATTGGGGGTATTACTCCCGGAAGCATGCCTCCTTTTTCAAAGTCCTTATTGGAGGAAGGTGCTGCCATTAAAGCATTTAAGCTTGTTGAAAAGGGGATTTTCCAAGAAGAAGGGATTATTAAACTTCTGCAGTTCCCAGGTTTTGATGAGCGGGGAAATAAGATCTCAGGAACTCGAAGGATTCAGGATAACTTATCAGATCTGCGAGCACAAGTAGCTGCAAATCAGAGAGGAATTTCTCTAGTCCAAGAGCTCATTGAGCAGTATGGTCTGGAAACTGTTCAGGCATACATGAATTATGTACAGATGAATGCAGAAGAAGCAGTAAGAGAGATGCTCAAGACAGTTGGTCATAAAGTTTCATCCAAGTCAAATGAAAATTTTGTGAATATTGTAGAAGAGGACTATATGGATGATGGATCTGTTATTCACTTGAAACTAAGCATTGATTCTAACAAAGGAGAAGCAACTTTTGATTTTGGCGGGACCAGTGCAGAAGTTTATGGTAATTGGAATACACCAGAAGCTGTAACAGCTGCAGCAGTAATATACTGTGTTCGATGTTTGGTAGATGTTGAAATTCCACTCAATCAAGGTTGTTTGGCTCCTGTGAGGATTCTTATTCCAGAAGGCTCGTTCCTTTCTCCTAGTGATATGGCTGCTGTTGTTGGAGGTAACGTCCTCACATCCCAGAGGATAACTGATGTTATTTTTACTGCATTTCAAGCCTGTGCTTGTTCACAGGGTTGTATGAATAATCTTACATTTGGAGATGATACTTTTGGTTACTATGAAACCATTGGCGGTGGGAGTGGGGCTGGTCCAGCCTGGGATGGTACCAGCGGAGTCCAGTGCCACATGACTAACACAAGAATGACTGACCCAGAGATTTTTGAGCAAAGGTATCCGGTTATTCTGCACAAGTTTGGACTAAGGGAAAACAGTGGGGGATCAGGATACCATAGAGGTGGTGATGGGCTTGTAAGAGAAATAGAGTTTAGGTGCCCAGTTATTGTAAGCATTCTTTCTGAGAGACGTGTGCATGCACCAAGAGGCTTGAAGGGAGGAAAAGATGGTGCTCGTGGGGCTAATTACCTTATAAAGAAAGATAAACGAAAGATTTATCTTGGTGGTAAGAATTCAATTGAGGTGCAACCAGGGGATATTCTTCAGATTTTGACTCCTGGTGGTGGTGGATGGGGTTCTCCATTTGCTCTTTTCCTAACTACGGCATCTCAAAACCTGCTGTGTGTTAAATTAGCAGAGGAGCTTGGGGTGATAGTTTCAAACGCATGGGTTTCATGGTTTGAGGCAGCTAGTTTACCTCCATTAGTTTCTCTTGTTGCCACACTGTTGATTTTATACAAACTTTATCCACCTGAAATTGAAGACACATCAGAAGTACCTGCCATGGCTGCAAAAAAATTGGAAAGTATGGGTCCTGTCACAAATGATTGGATTATGGTTGGTACAATGCTGCTTGCGATCTCTTTGTGGATCTTAGGAGAGACAATTGGCATTCCAAGTGCTATAGCTGCAATGATTGGCTTATGA 4134 0.4228 MGSVTEGKLKFCIDRGGTFTDVYAEIPGQSDGRVLKLLSVDPLNYDDAPVEGIRRILEEFTGGKIPRNSKIPTEKIEWIRMGTTVATNALLERKGERIAVCVTQGFRDLLQIGNQARPSIFDLTVSKPSNLYEEIVEVEERVQLVQDKEAEDQVTSSLVKGISGELVRIVKPLNEEALKPLLKKLLEKGISCLAVVLMHSYTYPQHEQKVEKLALSLGFRHVSISSALTPMVRAVPRGLTASVDAYLTPVIKEYLSGFMSKFDEGLGKLNVLFMQSDGGLAPESTFSGHKAILSGPAGGVVGYSQTLFGLETDKPLIGFDMGGTSTDVSRYAGSYEQVLETQIAGAIIQAPQLDINTVAAGGGSKLKFQFGAFRVGPESVGAHPGPVCYRKGGELAITDANLVLGYVIPDYFPSIFGPNEDQPLDVKSTREEFEKLAEQINAYRKNQDPSAKYMTVEQIALGFVNVANETMCRPIRQLTEMKGHETKNHALACFGGAGPQHACAIARSLGMKEVLIHKFCGILSAYGMGLANVVEEEQEPYSAVYGAESTIEVTQREAMLLRQVKQKLQNQGFREESISIETYLNLRYEGTDTAIMVKRQIAEDGKLCDYATEFVKLFQQEYGFKLLNRKIMICDVRVRGIGVTNILKSLALEPASGSPKVDGYYQVYFGNGWQETPLYKLENLGYGHIMLGPAIIMNGNSTVIVEPNCRAIITKYGNIKIEIDSPLSSVKISDKVADVVQLSIFNHRFMGIAEQMGRTLQRTSISTNIKERLDFSCALFDPSGGLVANAPHVPVHLGAMSSTVRWQLNYWGDNLNEGDVLVTNHPCAGGSHLPDITVVTPVFYNGKLVFFVANRGHHAEIGGITPGSMPPFSKSLLEEGAAIKAFKLVEKGIFQEEGIIKLLQFPGFDERGNKISGTRRIQDNLSDLRAQVAANQRGISLVQELIEQYGLETVQAYMNYVQMNAEEAVREMLKTVGHKVSSKSNENFVNIVEEDYMDDGSVIHLKLSIDSNKGEATFDFGGTSAEVYGNWNTPEAVTAAAVIYCVRCLVDVEIPLNQGCLAPVRILIPEGSFLSPSDMAAVVGGNVLTSQRITDVIFTAFQACACSQGCMNNLTFGDDTFGYYETIGGGSGAGPAWDGTSGVQCHMTNTRMTDPEIFEQRYPVILHKFGLRENSGGSGYHRGGDGLVREIEFRCPVIVSILSERRVHAPRGLKGGKDGARGANYLIKKDKRKIYLGGKNSIEVQPGDILQILTPGGGGWGSPFALFLTTASQNLLCVKLAEELGVIVSNAWVSWFEAASLPPLVSLVATLLILYKLYPPEIEDTSEVPAMAAKKLESMGPVTNDWIMVGTMLLAISLWILGETIGIPSAIAAMIGL 1377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi03g1116 1377 PANTHER 5-OXOPROLINASE RELATED 5 1257 IPR045079 GO:0016787
Glsi03g1116 1377 Pfam Hydantoinase B/oxoprolinase 738 1263 IPR003692 GO:0003824
Glsi03g1116 1377 Pfam Hydantoinase/oxoprolinase N-terminal region 10 216 IPR008040 -
Glsi03g1116 1377 Pfam Sodium:sulfate symporter transmembrane region 1266 1376 IPR001898 GO:0016020|GO:0022857|GO:0055085
Glsi03g1116 1377 Pfam Hydantoinase/oxoprolinase 237 536 IPR002821 GO:0016787
Glsi03g1116 1377 Pfam Hydantoinase/oxoprolinase C-terminal domain 558 714 - -
Glsi03g1116 1377 Coils Coil 551 571 - -
Glsi03g1116 1377 Coils Coil 426 446 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi03g1116 Glsi-ChrGlsi03 72195914 72201714 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi03g1116 1261 1377 Antiporters AT5G64290 72.034 6.48e-47 176