Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi03g1107 ATGACTATGGCGCCACCTGAACTTCCGTTGGGAATGAGATTCCTTGTCACAGATGATGTACTTCTTCGGTATTACCTCTACAAAGTGATTACAGGCCAATCTTTACCCGAAGAGGTGGAAGGTGAAGACTTGTACTTCTTCACAATGCTGAAGAGAAAAAATGCAAACGTTAACGTTAAGAGAGTTGAGCTAAGAGTGGGGATAGGATCATGGGTGGGAGAGGACGTTGGGAAGAAGATAATGAATGATGGAACTAACCATTGTGTTGGGATGAAGACGAGGCTTCGGTATGAGAAGAACGGAACCGATTATGACGGTGCTTGGATCATACATGAGTACTCTCTCAATCACTCTATTTTTTCCTGA 366 0.4344 MTMAPPELPLGMRFLVTDDVLLRYYLYKVITGQSLPEEVEGEDLYFFTMLKRKNANVNVKRVELRVGIGSWVGEDVGKKIMNDGTNHCVGMKTRLRYEKNGTDYDGAWIIHEYSLNHSIFS 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi03g1107 121 PANTHER NAC TRANSCRIPTION FACTOR 56 8 116 - -
Glsi03g1107 121 SUPERFAMILY NAC domain 3 118 IPR036093 GO:0003677|GO:0006355
Glsi03g1107 121 ProSiteProfiles NAC domain profile. 1 121 IPR003441 GO:0003677|GO:0006355
Glsi03g1107 121 Pfam No apical meristem (NAM) protein 35 115 IPR003441 GO:0003677|GO:0006355
Glsi03g1107 121 Gene3D NAC domain 17 120 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi03g1107 Glsi-ChrGlsi03 72144503 72144947 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi03g1107 8 116 NAC Transcription Factor Family AT2G24430 30.303 4.16e-09 50.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Glsi03g1107 NAM 1.6e-13 No_clan