Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi03g1087 ATGAGATTCCTTCCCACAGATGACATACTCCTTCGTTATTACCTCTACAGAAAGGTTACAGGCCAATCTTTACCTGAAGGGGTGATTCTTGAATGTGATCTTTATGGGGATATAAACCCATGGGACATTTGGGAAGCCTATAATGAAAACATAGTTAAGTCGGCGCAAGGTGAAGACTTGTACTTCTTTACAATGCTGAAGAGGAAAAATCCCGACGCAAAGAGAGTTGAGCGAAAAGTGGGAATAGGATCATGGGTGGGAGAGGACGTTGGGAAGAAGATAATGGATTATGCAACTAACCAGTGTATTGGGATGAAGAAGAGGCTTCGGTTTGAGAAGAGCAGAACCGATCATGACGGTGGTTGGATCATGCACGAGTACTCTCTCAATCACTCTCTATTTCCTCCTTATTTCCGAGTGAGCAAAGGTGGAAGTGTTTTAGGCAAAGTGGGGATAATGCCTGGAAAGTTTGGTGAAACAGATGGGTTCGTTTGCAGAAGATGGCGAGCTGCTAGGCTGAAGCTCATCATGCTTGAGAAGGTGAGAGCAAGAAGGCAAGCTGTAATGATGGATTTGCCAGAAACCATGGCTGAATAA 597 0.4439 MRFLPTDDILLRYYLYRKVTGQSLPEGVILECDLYGDINPWDIWEAYNENIVKSAQGEDLYFFTMLKRKNPDAKRVERKVGIGSWVGEDVGKKIMDYATNQCIGMKKRLRFEKSRTDHDGGWIMHEYSLNHSLFPPYFRVSKGGSVLGKVGIMPGKFGETDGFVCRRWRAARLKLIMLEKVRARRQAVMMDLPETMAE 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi03g1087 198 SUPERFAMILY NAC domain 1 136 IPR036093 GO:0003677|GO:0006355
Glsi03g1087 198 Pfam No apical meristem (NAM) protein 1 129 IPR003441 GO:0003677|GO:0006355
Glsi03g1087 198 Gene3D NAC domain 6 150 IPR036093 GO:0003677|GO:0006355
Glsi03g1087 198 PANTHER NAC TRANSCRIPTION FACTOR 56 2 155 - -
Glsi03g1087 198 ProSiteProfiles NAC domain profile. 1 170 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi03g1087 Glsi-ChrGlsi03 71525663 71528045 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi03g1087 1 198 NAC Transcription Factor Family AT2G46770 30.846 4.21e-19 82.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Glsi03g1087 NAM 2.3e-23 No_clan