Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi03g1080 ATGCTGTGCAAGGAAGAAGCCAGTAAGACTCATGAACTGAGGCAGTTGAAGGGGGAAGAGCTGCAAGGATTGAATACAAAAGAATTACAGAAGCTAGAGGAACTTCTAGAAACAGGTCTGAGCTGTGTTACTAAAGCGAAGGAAATCCAGCTGATGGAAGTGAACCAGCGATTGAAGCAGGTGGTTAAGACCCTTGCACATGAACAAGATCTTTCGTCTGATTCAGCCTATATTGGCAGCACGTCTGATCCTCCTCAAGACTATGATAGTTTAGACACCTCTCTCAAATTGGGGTTAGTTTAA 303 0.4389 MLCKEEASKTHELRQLKGEELQGLNTKELQKLEELLETGLSCVTKAKEIQLMEVNQRLKQVVKTLAHEQDLSSDSAYIGSTSDPPQDYDSLDTSLKLGLV 100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi03g1080 100 MobiDBLite consensus disorder prediction 73 89 - -
Glsi03g1080 100 Pfam K-box region 8 69 IPR002487 GO:0003700|GO:0005634|GO:0006355
Glsi03g1080 100 MobiDBLite consensus disorder prediction 73 100 - -
Glsi03g1080 100 ProSiteProfiles K-box domain profile. 1 75 IPR002487 GO:0003700|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi03g1080 Glsi-ChrGlsi03 71374084 71377145 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi03g1080 2 99 MADS-box Gene Family AT2G22540 35.000 3.08e-15 66.6