Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi03g1048 ATGGAACACCAGGTTTCATGGCTTACCCCTCTAAAGCGATTGAGGCTCATGCAACAGCAACAAGAGCTACAAAAACAGCAAGAACACAACCATATAAAGCAGGAAGAAGGCACTATTTTTTCCTGCACAACGTTACCAGTGAAGAAGCGCAAGGAATCGCGAAATTCAACATTTCTTTCTGACCCACCAGTTTCTACCTCTGCCACTGCTTATTCGCTACCAGCTAAGAAAAGGGTATGGGCGCTTCAACCTCATTTTTCTTCCAATGTTGTTGTTTCTCCCATTGACCTCAATGTTGAATACAAACCATCTGTTGAGGAAGAGGTACAAGTAGAGGACGATGAGCCCAATATTGGGATCCCATTACTACCACATTCCCAGAATGAAAGGGAAGAAAACGGACGTGGAGATGTTGAGGGTGATAATGATGATGATGGGATTGTATGTGCTATACGTCAAAGCACAGATGGAGACCCAGAAGATCCAATTGTTCTCTGTGATGGGTGTGATCTAATGGTGCACAACTCCTGCTATGGTAATCCCCTTATAAAGGGTATACCAGAAGATAGTTCTTGTCTTGCCACAAAGAAACATGAAGCAAATTTTGATGGCCAACCACCACTGAGAGAGGTTAACCGCTTGCACATGTAG 651 0.4378 MEHQVSWLTPLKRLRLMQQQQELQKQQEHNHIKQEEGTIFSCTTLPVKKRKESRNSTFLSDPPVSTSATAYSLPAKKRVWALQPHFSSNVVVSPIDLNVEYKPSVEEEVQVEDDEPNIGIPLLPHSQNEREENGRGDVEGDNDDDGIVCAIRQSTDGDPEDPIVLCDGCDLMVHNSCYGNPLIKGIPEDSSCLATKKHEANFDGQPPLREVNRLHM 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi03g1048 216 MobiDBLite consensus disorder prediction 107 144 - -
Glsi03g1048 216 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 124 202 IPR013083 -
Glsi03g1048 216 Pfam PHD-finger 161 181 - -
Glsi03g1048 216 MobiDBLite consensus disorder prediction 128 144 - -
Glsi03g1048 216 Coils Coil 16 36 - -
Glsi03g1048 216 PANTHER PHD FINGER PROTEINS 99 190 - -
Glsi03g1048 216 SUPERFAMILY FYVE/PHD zinc finger 138 189 IPR011011 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi03g1048 Glsi-ChrGlsi03 69323007 69325380 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi03g1048 20 202 C2H2 Transcription Factor Family AT3G14740 43.137 4.56e-39 135