Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi03g0991 ATGGCAGCATGCCAATACTGTAAGAATACTCATCTCCTTCCAGTTTTGACAATGACCATAATACTATTGTTTCTTACGATTCCTTTTGCCACTCCACTAACCTTCAACTTTGAGCAATTCGGTGACAATGAACCGAACTTAATACTCGATGGATATGTTTATTATGACAAGGGATTCCTTCAACTCACCAAGTCTAAGCAAGACAGTTATGGTAGAGTCAAATACTACAAAAATCTGCATCTTTGGGACAGAAATTCAGGAAAGGTCACGGACTTTTCTACCCATTTCTCCTTCATCATCAATTCATCCAACAAGACCAATCAGGGCGATGGCATCACCTTCTTCCTGGCACCACCCAACTTTCCCCTTCCTGATCCAGTAGATGGCAGTGGAATTGGTCTTGTGAGCCGTTCTCAACTGGAAGATAAATATTACACAAACGAAAACCCATTTGTGGCAGTGGAGTTTGACACCTTTGCTAATGACTGGGATCCCCGATATGATCATGTGGGGATCGATGTTAAATCTATCAAAACCCATGACACCACACAATGGTTCAGTATCAAGGATGGGAGAAGATATGATGCTGATATTATTTACAATTCTAGCTCGAACAATTTAAGTGTCAGCTTTCATGGGTATCAGAATAATACCAAAGTTGAACAAAATCTCTATGAAATCGTCAACTTGACTGACGTTCTTCCAGAGTGGGTTGAATTTGGCTTCTCTTCAGCGACAGGGTTTTACTATGAGATCCATACACTTTGCTCTTGGTCCTTCAATTCAAGTTTGGACATGGAAGATCAAAACAATAAAAGTAAGAAAGGAGTAATAGTGGGGCTAAGCATTGTAGCAGGAGGTTTAGCTTTAATCTTTGTCATGGGCTTAACTTGGCTTCTGATATGGAAGATGAGGAGAAGAAGCAGAGGCACAGATCTTTTTGATTTCAATCTTAACATGGACAATGATTTTGAAAGAAACACTCTGCTTGGACCTAAGAGGTTTTCTTATAAACATCTTGTTACAGCAACTAATAGTTTTGCAGAAGAGCAGAAACTTGGGGAGGGAGGTTTTGGTGGAGTTTACAAAGGATATATAAGAGAATTGGACAGCCATGTTGCCATTAAAAAGATATCACAAGGATCTAAACAGGGATGGAAGGAGTTTGCATCAGAAGTAAAGATCATTAGTCAACTGAGGCATAAAAATTTAGTTCAACTCATTGGATGGTGCCATGAGAAGAATGATTTAATACTAGTTTACGAGTTCCTGGAAAATGGAAGCCTAGATTACCATCTCTTTAAAGGAAAAAGCCTCCTGACATGGGAAGTTAGATATAACATTGCTGCAGGCCTGGCCTCGGCATTGTTGTACCTCCACGAAGAGTGCGAGCGATGTGTGATTCACAGAGACATAAAATCAAGCAACATTATGTTGAATTCAAACTTCAATGCAAAGCTCGGAGATTTTGGGCTAGCCAGATTGGTAGACCATGGGCAAGAGTCTAAAACAACAGTTTTAGCAGGAACGCTGGGATATATAGCTCCTGAATATGCCGCTAAAGGGAAGGCTAGTAGGGAGTCTGATGTATACAGTTTTGGAGTTGTTGCTTTGGAGATAGCCAGTGGAAGAAAACCAGTAGAACCCAAAGCCAGTGAAGAACAGGTCTTCCTAGTAGATTGGATTTGGGAACTTTATAGCATGCATAATAATATCCTTGAAGCAGCAGATGAGACACTATGTGGGGACTTTGATAAGCAACAAATGCTAAGGTTAATGATAGTTGGGCTTTGGTGTGCTCTCCCAGATTACCTTCTCAGGCCTACAATTAGACAAGCAGTTCAGGTGCTTAATTTTGAAGCTCCACTACCCACTCTTCCATCACAGTGGCCTGAACCTACCTATAATGCTTGTCCTGTCAGTGCATCTACATCTTCCAGCTCTTTTCCCTCCAGTACTAGTGCTTCTGGGATCAACCATACCCTGCCTTCAAGTAATAGCTCTGCCACTGGATCCTCACAATCTTGCACATCTTTTGCAGTCATTTCTCCATCAGCTGCCCTTCTAAATACATACTAA 2079 0.4108 MAACQYCKNTHLLPVLTMTIILLFLTIPFATPLTFNFEQFGDNEPNLILDGYVYYDKGFLQLTKSKQDSYGRVKYYKNLHLWDRNSGKVTDFSTHFSFIINSSNKTNQGDGITFFLAPPNFPLPDPVDGSGIGLVSRSQLEDKYYTNENPFVAVEFDTFANDWDPRYDHVGIDVKSIKTHDTTQWFSIKDGRRYDADIIYNSSSNNLSVSFHGYQNNTKVEQNLYEIVNLTDVLPEWVEFGFSSATGFYYEIHTLCSWSFNSSLDMEDQNNKSKKGVIVGLSIVAGGLALIFVMGLTWLLIWKMRRRSRGTDLFDFNLNMDNDFERNTLLGPKRFSYKHLVTATNSFAEEQKLGEGGFGGVYKGYIRELDSHVAIKKISQGSKQGWKEFASEVKIISQLRHKNLVQLIGWCHEKNDLILVYEFLENGSLDYHLFKGKSLLTWEVRYNIAAGLASALLYLHEECERCVIHRDIKSSNIMLNSNFNAKLGDFGLARLVDHGQESKTTVLAGTLGYIAPEYAAKGKASRESDVYSFGVVALEIASGRKPVEPKASEEQVFLVDWIWELYSMHNNILEAADETLCGDFDKQQMLRLMIVGLWCALPDYLLRPTIRQAVQVLNFEAPLPTLPSQWPEPTYNACPVSASTSSSSFPSSTSASGINHTLPSSNSSATGSSQSCTSFAVISPSAALLNTY 692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi03g0991 692 ProSitePatterns Legume lectins beta-chain signature. 152 158 IPR019825 -
Glsi03g0991 692 SMART serkin_6 347 605 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi03g0991 692 SUPERFAMILY Protein kinase-like (PK-like) 332 656 IPR011009 -
Glsi03g0991 692 ProSitePatterns Serine/Threonine protein kinases active-site signature. 467 479 IPR008271 GO:0004672|GO:0006468
Glsi03g0991 692 ProSiteProfiles Protein kinase domain profile. 347 626 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi03g0991 692 CDD lectin_legume_LecRK_Arcelin_ConA 33 264 IPR001220 GO:0030246
Glsi03g0991 692 FunFam Lectin-domain containing receptor kinase A4.3 424 637 - -
Glsi03g0991 692 SUPERFAMILY Concanavalin A-like lectins/glucanases 31 267 IPR013320 -
Glsi03g0991 692 Pfam Legume lectin domain 33 274 IPR001220 GO:0030246
Glsi03g0991 692 Gene3D Phosphorylase Kinase; domain 1 332 423 - -
Glsi03g0991 692 FunFam L-type lectin-domain containing receptor kinase IX.1 332 423 - -
Glsi03g0991 692 ProSitePatterns Legume lectins alpha-chain signature. 234 243 IPR000985 -
Glsi03g0991 692 PANTHER - 58 627 - -
Glsi03g0991 692 Pfam Protein kinase domain 348 561 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi03g0991 692 Gene3D Transferase(Phosphotransferase) domain 1 424 638 - -
Glsi03g0991 692 Gene3D - 31 285 - -
Glsi03g0991 692 ProSitePatterns Protein kinases ATP-binding region signature. 353 377 IPR017441 GO:0005524
Glsi03g0991 692 FunFam L-type lectin-domain containing receptor kinase IX.1 31 273 - -
Glsi03g0991 692 CDD STKc_IRAK 353 618 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi03g0991 Glsi-ChrGlsi03 64753234 64755312 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi03g0991 21 636 Receptor kinase-like Gene Family AT5G10530 47.235 1.94e-177 519
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Glsi03g0991 Pkinase 1.1e-50 CL0016