Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi03g0986 ATGGTATGGGAAGGAAGACCCTCATCCTGCTCTGCGGGATTCTGGGTGTTGTCTCTCTTTATTATCCTTTTAGCCTCGCAAACATGTACGGCAAAGCAACAGCATTACTGTGCTCCTTCTTCTTGCGGCAAAGTACCCAACATAAGCTACCCATTTCGATTAAAACAAGACCCGAAGAAGTGTGGCGACCGGAGATATGAGTTAGATTGTGTTAACAACGTTGCAGTCTTACATTTGAATTCTGCAGAGTACTATGTTCAAGCAATTAACTACAACAACTACACAATCCGCCTCGTGGATCCCGACATTCAAGAGGCTAATTGCTCCTCCATGCCTCGCTACTTATTGTTTTTTTCCAATTTCAGTGGCTTATACAGCACCCAAGACTCGGACTTGTATTTCAAAGATCAACAGATAGATTCATATCAAGCCACTCGAGCCATCGATTCAAATCAAGCCGCTGACGTCATTTATTACGCGTTCGTTGGGTATAATCTATTTCAGCCTATAATTTACTTGAGCTGTGATTATGCTGTGAGCGACGATGTGTCCTATGTGGATACCACTTCTTGCGTTGATTCGCGTACATACGCTATTGTTGGGGACTTGAACCTGACAAATTGGAAGCCGGGCTGCCATGTGAGGGCAGTCTCTCCTACTTCCTCGCCTATGATGGACGGTGGCAATATTTCGTACCATGATATTCATAGGCAACTAGTCTATGGATTTGAGCTTTCCTGGATGAATTTTGTTTGTGATGCTCATTGTGGATCCAGACCTTGCTTCTTCAACCGGACCGTTGAAACCGTTCAGTGCGATGATAACACCGACACCAACTGTTATTATCTCAATGGAAAGGCCCATTCTTGCGGAATATACAGTTTAATAACATTTCATGCCATACATCTTGACAAGGCAAATCCAATAAACAGAGCATTAGCGGTTGGACGGTATGGCCTACCATCATTTGTGGCAGGTAGATTTCTGTTTGGTGCTACATTTCTGATTGCCATATTGATTCATAAGTGGCGTAGCAGACATTTATCAGTTTATGAAAATATTGAGAACTTTCTGCAAGATTGTGAACTTATGCCCATAAGGTACTCATACAAGGAAATTAAGAAGATGACCAGTAATTTCAAGTTCAAGTTGGGTCAAGGTGGCTATGGCTCTGTATACAAAGGGAAGTTACGCAGTGGGCCTTATGTAGCAATAAAGATGTTGGGTAAAGCCAAAACTAATGGGCAAGACTTTATCAGTGAAGTGGCAACCATAGGAAGGATACACCATGTCAATGTGGTTCGGCTTATTGGATATTGTGTTGAGGGATCAAAGCGTGCTCTTGTCTATGAATTTATGCCTAATGGATCTCTTGATAGATATATTTTCTTGAAAGAAGGAACCATCCCTTTAAGTTATAAGAAAATATATGAGATATCTCTTGCAGTGGCTCGTGGAGTAGCTTATCTTCATCAGGGCTGTGACATGCGAATTCTACATTTTGATATCAAGCCTCATAACATTCTTCTGGATGAAAACTTCATCCCTAAAGTTTCAGATTTTGGACTTGCAAAGCTTTATCCAATGAATGATAGCATAGTCACTTTGACTGCAGCAAGAGGAACTCTAGGCTATATGGCTCCTGAATTGTTCTACAAAAATATTGGAGGAATCTCCTTTAAGGCTGATATTTACAGCTTTGGAATGCTTTTGATGGAAATGGCAAGCAGGAGAAAGAACTCAAATCCGCATGCAGAGCATTCAAGCCAAGTTTACTTTCCCTTTTGGATTTATGACCAATTTATAGAAGAGAACGATATAGAAATGGAAGATGCTACAGAGGAGGAAAAGAATGTAGCAAAGAAGATGTTCATAACTGCACTTTGGTGTATACAATTGAAGCCTCATGACCGTCCTTCAATGAACAAAGTGGTGGAGATGCTTGAAGGAGAAATGGAAAGCTTAGAAATGCCTCCAAGACCTTCTTTTTGTCCAGATGAAACTGTACTAAATGATCTTGTAAGCAGCTTTGACCAATCACAATCAAGTGGCTTCACTAGTTCTACTAGTTATCTTGGGGAAACTGCAAATGATCTTCTAGAGGAGAACAGTGCTTGA 2118 0.4098 MVWEGRPSSCSAGFWVLSLFIILLASQTCTAKQQHYCAPSSCGKVPNISYPFRLKQDPKKCGDRRYELDCVNNVAVLHLNSAEYYVQAINYNNYTIRLVDPDIQEANCSSMPRYLLFFSNFSGLYSTQDSDLYFKDQQIDSYQATRAIDSNQAADVIYYAFVGYNLFQPIIYLSCDYAVSDDVSYVDTTSCVDSRTYAIVGDLNLTNWKPGCHVRAVSPTSSPMMDGGNISYHDIHRQLVYGFELSWMNFVCDAHCGSRPCFFNRTVETVQCDDNTDTNCYYLNGKAHSCGIYSLITFHAIHLDKANPINRALAVGRYGLPSFVAGRFLFGATFLIAILIHKWRSRHLSVYENIENFLQDCELMPIRYSYKEIKKMTSNFKFKLGQGGYGSVYKGKLRSGPYVAIKMLGKAKTNGQDFISEVATIGRIHHVNVVRLIGYCVEGSKRALVYEFMPNGSLDRYIFLKEGTIPLSYKKIYEISLAVARGVAYLHQGCDMRILHFDIKPHNILLDENFIPKVSDFGLAKLYPMNDSIVTLTAARGTLGYMAPELFYKNIGGISFKADIYSFGMLLMEMASRRKNSNPHAEHSSQVYFPFWIYDQFIEENDIEMEDATEEEKNVAKKMFITALWCIQLKPHDRPSMNKVVEMLEGEMESLEMPPRPSFCPDETVLNDLVSSFDQSQSSGFTSSTSYLGETANDLLEENSA 705
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi03g0986 705 SUPERFAMILY Protein kinase-like (PK-like) 363 649 IPR011009 -
Glsi03g0986 705 ProSitePatterns Serine/Threonine protein kinases active-site signature. 498 510 IPR008271 GO:0004672|GO:0006468
Glsi03g0986 705 PANTHER RUST RESISTANCE KINASE LR10-RELATED 351 669 IPR045874 GO:0004672
Glsi03g0986 705 ProSiteProfiles Protein kinase domain profile. 378 655 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi03g0986 705 Pfam Protein kinase domain 382 646 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi03g0986 705 FunFam PR5-like receptor kinase 453 659 - -
Glsi03g0986 705 Gene3D Phosphorylase Kinase; domain 1 355 452 - -
Glsi03g0986 705 FunFam serine/threonine-protein kinase PBS1-like 348 452 - -
Glsi03g0986 705 SMART serkin_6 378 648 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi03g0986 705 ProSitePatterns Protein kinases ATP-binding region signature. 384 406 IPR017441 GO:0005524
Glsi03g0986 705 Pfam Wall-associated receptor kinase galacturonan-binding 37 100 IPR025287 GO:0030247
Glsi03g0986 705 Gene3D Transferase(Phosphotransferase) domain 1 453 663 - -
Glsi03g0986 705 CDD STKc_IRAK 384 650 - -
Glsi03g0986 705 MobiDBLite consensus disorder prediction 679 705 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi03g0986 Glsi-ChrGlsi03 64659846 64662910 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi03g0986 19 682 Receptor kinase-like Gene Family AT5G38260 35.119 1.14e-112 352
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Glsi03g0986 Pkinase 1.2e-46 CL0016