Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi03g0985 ATGAAATGTTATCCCACTTCCTGCAGGTGCTTGTGGTTGATCATGGTGTTGCTCCAGTTCACCAAAATGGCGGTGTGCCATAATAATGAGTGCAGTGAATCAAGATGCGGACATCGTGGCCCTCCAATTCGGTTTCCCTTCCGCCTTCAAAACATTGACCCGGATCACTGCGGCTATCCTGGGTTTGAGCTAACCTGTACTCATGAGCATGAAACGCTGCTTGAGCTTCCTGCACTTCCAGTTCCAATTAAATTCCAGGTTAATTACATAGATTACAAAAGTCGGTATGTATCAATATCAGACCCAGAAAATTGCCTTCCCAGACAGTTTCTAAAGCTCAACAACTCTTCAAATTCTCCTTTCCAATTTCCATCGTCGAAAGAATCATCAACTGTCATCTCTTTCTTCAAATGTGCTCCTAATAAGTTCTCCTGCTCCATACATGCTGCTGACTCGGCCAATACCCTCCTTGATTCAGGCTTAATATCCTGCACCAAGTTGTTTGACACAACTCCGTCAAACTTCACAGATACCGAAGGCCTACAGACAAATAATTTGGGTTTATGGTGGTTCAAACCAGATTGTGGTGAGTGTGAAGAGAAAGGCAAATTATGTAAACTGCACAACAATGGCACTGAAGATGCTATCCAATGTTACGATCGCCCGCCCAAAACCATCAGTAAGAGACTTCTAGCTGTTACGGGTGTATTTGCTGGTTCGATTGTTCTGGTGCTTGTACTCCTTGCATTCTTTCAAATTTATCGCTTTTTTCGAATGAAAGGAGAGGATCAAGCAAGAGTGGAAAAATTTTTGGAAGATTACAGAGCACTCAAGCCTACTAGATTCTCTTACGCTGATATCAATAGAATCACAAACCGTTTCAAGGAAAAGTTAGGCGAAGGAGCTCACGGAGCAGTGTTCAGAGGAAAGCTCTCCAATGAAATTTCAGTTGCCGTGAAAATACTCAATAACACAGATGGAGACGGGAAAGAGTTCATCAATGAAGTGGGAACCATGACAAAAATCCACCACGTTAATGTGGTTCGCATGCTTGGCTTCTGTGCAGATGGATTTCATCGAGCTCTTGTCTATGATTTCTTCCCAAACGGTTCATTGCAGAAGTACATTGGTTTCCCAGAAAACATGGACAATTTCCTTGGCTGGGAGAGGCTGCAACAAGTTGCTCTTGGCATAGCCAGAGGGATTGAGTATCTCCACCAGGGATGCGATCATCGAATTCTTCACTTCGACATCAATCCTCACAACGTGCTATTAGATGACAACTTTGTTCCAAAAATTACTGATTTTGGTTTAGCCAAATTCTGCTCTAAAAATCAAAGCACAGTGTCAATGACCGCAGCCAGAGGAACCTTGGGCTACATTGCACCTGAGGTTTTCTCAAGAAACTTTGGAAATGTGTCCTATAAATCTGACATTTACAGTTACGGAATGTTGTTGCTAGAAATGGTTGGAGGGAGGAAAAATGTGGACATTTCAGATGAGGAAACTTGCCAAGTTCTGTATCCAGAATGGATCCATAATCTGCTTGAAGGAGGAGAAATACATATCCCAATTGAGGATGAAGGAGATGATAAAATTGCCAAAAAGCTTGCAGTTGCTGGACTTTGGTGCATCCAATGGCACCCAGTGGATCGTCCATCCATGAAAACTGTGGTACAAATGCTGGAAGGAGAGGGAGACAAACTAACAGTTCCCCCTAGTCCATTTAACTCAAGCTCAACAGCTTCAATTAGTTCTAGTTCAATTATTCCTACAAGACGGCAGCATTTGGGGTTGGAAGTGATTCATGAATGA 1815 0.4281 MKCYPTSCRCLWLIMVLLQFTKMAVCHNNECSESRCGHRGPPIRFPFRLQNIDPDHCGYPGFELTCTHEHETLLELPALPVPIKFQVNYIDYKSRYVSISDPENCLPRQFLKLNNSSNSPFQFPSSKESSTVISFFKCAPNKFSCSIHAADSANTLLDSGLISCTKLFDTTPSNFTDTEGLQTNNLGLWWFKPDCGECEEKGKLCKLHNNGTEDAIQCYDRPPKTISKRLLAVTGVFAGSIVLVLVLLAFFQIYRFFRMKGEDQARVEKFLEDYRALKPTRFSYADINRITNRFKEKLGEGAHGAVFRGKLSNEISVAVKILNNTDGDGKEFINEVGTMTKIHHVNVVRMLGFCADGFHRALVYDFFPNGSLQKYIGFPENMDNFLGWERLQQVALGIARGIEYLHQGCDHRILHFDINPHNVLLDDNFVPKITDFGLAKFCSKNQSTVSMTAARGTLGYIAPEVFSRNFGNVSYKSDIYSYGMLLLEMVGGRKNVDISDEETCQVLYPEWIHNLLEGGEIHIPIEDEGDDKIAKKLAVAGLWCIQWHPVDRPSMKTVVQMLEGEGDKLTVPPSPFNSSSTASISSSSIIPTRRQHLGLEVIHE 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi03g0985 604 SUPERFAMILY Protein kinase-like (PK-like) 275 563 IPR011009 -
Glsi03g0985 604 PANTHER RUST RESISTANCE KINASE LR10-RELATED 264 579 IPR045874 GO:0004672
Glsi03g0985 604 ProSiteProfiles Protein kinase domain profile. 292 577 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi03g0985 604 Pfam Protein tyrosine and serine/threonine kinase 294 562 IPR001245 GO:0004672|GO:0006468
Glsi03g0985 604 FunFam serine/threonine-protein kinase PBS1-like 260 366 - -
Glsi03g0985 604 ProSitePatterns Protein kinases ATP-binding region signature. 298 320 IPR017441 GO:0005524
Glsi03g0985 604 Pfam Wall-associated receptor kinase galacturonan-binding 31 101 IPR025287 GO:0030247
Glsi03g0985 604 FunFam PR5-like receptor kinase 367 573 - -
Glsi03g0985 604 Gene3D Phosphorylase Kinase; domain 1 266 366 - -
Glsi03g0985 604 Gene3D Transferase(Phosphotransferase) domain 1 367 571 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi03g0985 Glsi-ChrGlsi03 64656232 64659209 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi03g0985 11 588 Receptor kinase-like Gene Family AT1G66910 34.308 8.68e-109 339
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Glsi03g0985 PK_Tyr_Ser-Thr 1.7e-43 CL0016