Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi03g0983 ATGTTGACATCAATTTTCTTCCTTTTGATTATCCCGCATGCATTTTCCTTATCCTTTAGCTTCCCTAGTTTCGATCCCAATGATAAGAACATAACATATGAGGGATCAGCTTCTTGTGTAGCCCCATCCATCCAGCTGACAAGAAACCAGCGGGATCAAGACTTGACTGCTAGTGTCGGTCGAGCCACATACCACCAACCGATGCGCCTGTGGGACAAAACAACCGGGAACCTCACAGATTTCACCACCTATTTTACCTTTGTCATTAGTTCAGAAGACGATAGATATGGAGATGGGATGGCCTTCTTCCTTGCTCCTGCTGATTCAAAGATGCCTAATGTCACCAAAGGAGGTGCCATGGGTCTGGCTCTTGATAATCAGCCATTAAATTCAACGGAAAATCCATTTGTTGCTGTGGAGTTTGATATCTTCAAAAACCGCTGGGATCCACCCAAAGAACACGTGGGTGTCAATATAAATTCTATGAGATCTTTTCAAAATGTGACATGGTTGGCTGACATCAAGGAAGGGAAAAGGAATGAGGCTAAGATCAGTTACAATTCAAGTTCACTAAATTTAAGCATTTTGTTCACTGGTTTTGATAATGGCACCACTGTGCAGCAACATCTTCATGCCACGGTTGATCTGAGATATTATTTGCCTGAACGGGTTACTTTTGGATTCTCAGCTGCCACAGGAAATAGATCTGCAATACATAAGATCAATTCATGGAATTTTACCTCAACTTTAGAGGATTTCACAAATTCAGCTGCCAGTCAGAGGAGAAATAGAAGTACCACCGGGCTTGCAGTGGGATTGGGTACTGGAGGGTTTGTTTTAATTTGTGGCTTGTGTTTGATTTTGCTAGGCATGTGGAAGAGGGGGAAGAAAAATATGGAAACCGATGATTCCGAGTTTGATGAGTACATGAATGAAAGTTTTGAAAGGGGAACAGGACCTCGGAAGTATTCGCTTGTCGACCATGCAAAAGGTTCACAAACTACAGCTTTGGCTGGGACTATGGGCTACATGGCTCCTGAATCTGTCATAACTGGTAGAGCTAGCAAGGAATCAGATGTTTACAGTTTCGGAGTTGTTGCTTTGGAGATAGCTTGTGGAAGAAAACCCATCAACTACAAGGCCCCAGAAAATGAAATAAACATTGTGGAGTGGGTCTGGGGACGACTCTATGGGAGTGGGAGAATTCTTGAAGCAGCGGATCCAAGACTAAGTGGAGATTTTGATGAGCAGCAAATCAAATGTTTGATGATTGTGGGTCTTTGGTGTACTCACCCTGACAATAACAATAGGCCTTCAATAAGGCAAGCAATTCAAGTGCTTAACTTTGAAGCTCCACTGCCTAGTCTTCCATCAAGTTTGCCTGTACCGACATATATTGAGCTTCCAATGCGGTCATCCTCAGCCCCTTCCAGCACCAATACTTCAGAGGTAGGCCAAAACCAGAACATAAGCTTTAGTTCCAACACAAACTCTTCTGGGTTAACTGTAACTTCTGATGATGTTTCCCCTTCCAAGTCACTTTTGTACAATAGTTAA 1557 0.4297 MLTSIFFLLIIPHAFSLSFSFPSFDPNDKNITYEGSASCVAPSIQLTRNQRDQDLTASVGRATYHQPMRLWDKTTGNLTDFTTYFTFVISSEDDRYGDGMAFFLAPADSKMPNVTKGGAMGLALDNQPLNSTENPFVAVEFDIFKNRWDPPKEHVGVNINSMRSFQNVTWLADIKEGKRNEAKISYNSSSLNLSILFTGFDNGTTVQQHLHATVDLRYYLPERVTFGFSAATGNRSAIHKINSWNFTSTLEDFTNSAASQRRNRSTTGLAVGLGTGGFVLICGLCLILLGMWKRGKKNMETDDSEFDEYMNESFERGTGPRKYSLVDHAKGSQTTALAGTMGYMAPESVITGRASKESDVYSFGVVALEIACGRKPINYKAPENEINIVEWVWGRLYGSGRILEAADPRLSGDFDEQQIKCLMIVGLWCTHPDNNNRPSIRQAIQVLNFEAPLPSLPSSLPVPTYIELPMRSSSAPSSTNTSEVGQNQNISFSSNTNSSGLTVTSDDVSPSKSLLYNS 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi03g0983 518 SUPERFAMILY Concanavalin A-like lectins/glucanases 17 250 IPR013320 -
Glsi03g0983 518 MobiDBLite consensus disorder prediction 471 518 - -
Glsi03g0983 518 Pfam Legume lectin domain 16 252 IPR001220 GO:0030246
Glsi03g0983 518 FunFam Lectin-domain containing receptor kinase A4.3 323 467 - -
Glsi03g0983 518 PANTHER - 46 324 - -
Glsi03g0983 518 SUPERFAMILY Protein kinase-like (PK-like) 332 470 IPR011009 -
Glsi03g0983 518 Pfam Protein kinase domain 330 445 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi03g0983 518 Gene3D - 15 262 - -
Glsi03g0983 518 ProSitePatterns Legume lectins alpha-chain signature. 220 229 IPR000985 -
Glsi03g0983 518 CDD lectin_legume_LecRK_Arcelin_ConA 25 250 IPR001220 GO:0030246
Glsi03g0983 518 FunFam L-type lectin-domain containing receptor kinase IX.1 15 259 - -
Glsi03g0983 518 Gene3D Transferase(Phosphotransferase) domain 1 321 468 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi03g0983 Glsi-ChrGlsi03 64635583 64637613 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi03g0983 325 465 Receptor kinase-like Gene Family AT5G10530 62.500 1.16e-51 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Glsi03g0983 Lectin_legB 5.5e-70 CL0004