Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi03g0982 ATGGAGACATCCCACTACAAGAGCAAAACGTATCTCCTTCCTTGTTTAGCCATAACCAAATTGATTTTGTTTCTTATATTAACTCGTGCAACTCCAATAACCTTCAACTATCGGCAATTTCATGACAAAGATGAAACCTTAAATTACGTTGGAGATGTTTATCAGAAAAATGGGGTGCTTCAACTCACCAGGATATTTCTTTGGGATACATACACTATGCCCATGGTCCTTCACTTCAAGTTTGGATCTGGGAGTAAAGAAAGGCAAAAACAAGACAGGACCGATTACGGGGCTGAGCATTGGATTGGGTGTATTAATTGGTGGTTTATGCTTAGCTTGGCTAGTCATATGGAAGCTGAAGTCAAGATGGTGGAGTGGGTATGGGAACCCTATGGCATGGGTAATCTTACAGTTGATAGAAAGTTATTTGGAGACTTTTATGAGCAGGAATTGGAAAGGTTAATGACCGTTGGCCTTTGGTCTATTCATCCAGATTACATTCTGATTCCTAACATTAGACAAATGATAAGAAATGCAGAACAAGGGTTTAGATTATTAGACCTTGCAGCATACAGAGAATTAGAATATGATGTTGAACAGCCGCAAATGAAATGCTTGATGAATGTTGGCTTTAGCTTCCCTAGTTTCGATCCCAATGATAAGAACATAGCATATGAGGGATCAGCTTCTTGTGTAGCCCAATCCATCCAGCTGACAAGAAACCGGCAGGATCCAGCCTTGACTGCTAGTGCCGGTCGAGCCACATACCACCAACCGATACGCCTGTGGGACAAAACAACCGGGAACCTCACAGATTTCACCACCTATTTTACCTTTGCCATTAGTTCAGAAAACGATAGATATGGAGATGGGATGGCCTTCTTCCTTGCTCCTGCTGATTCAAAGATGCCTAATGTCACAAAAGGAGGTTTTGATAATGGCACCGCTGTACAGCAACATCTTCATGCCACGGTTGATCTGAGAGATTATTTGCCTGAACGAGTTACTTTTGGATTCTCAGCTGCCACAGGAAATAGATCTGCAATACATAAGATCAATTCATGGAATCTTACCTCAACTTTAGAGGATTTCACAAATTCAGCTGCCGGTCAGAGGAGAAATAGAAGCACCACCGGGCTTGCAGTGGGATTGGGTACTGGAGGGTTTGCTTTAATTTGTGGGTTGTGTTTGATTTTGCTAGGCATGTGGAAGAGGGGGAAGAAAAATATGGAAACGGATGATCACGAGTTTGATGAGTACATGAATGAAAATTTTGAAAGGGGAACAGGACCTCGGAAGTATTCTTTAGATATGCATCTGTTCAAGAACCAAGGGTTGTTGACATGGTCAGTAAGATGTAAAATAGCTCAAGGTTTGGCCTCTGCATTACTGTACCTTCATGAAGAATGGGAACAATGTGTACTTCACAGAGACATAAAATCAAGCAACATCATGCTAGATTCAAACTTCAATGCAAAACTTGGAGATTTTGGGTTAGCAAGGCTGGTAGACCATGCAAAAGGTTCACAAACTACAGCTTTGGCTGGGACTATGGGCTACATGGCTCCTGAATCTGTCATAACTGGTAGAGCTAGCAAGGAATCGGATGTTTACAGTTTCGGAGTTGTTGCTTTGGAGATAGCTTGTGGAAGAAAACCCATCAACTACAAGGCCCCAGAAAATGAAATAAACATTGTGGAGTGGGTCTGGGGACTCTATGGGAGTGGGAGAATTCTTGAAGCAGCGGATCCAAGACTAAGTGGAGATTTTGATGAGCAGCAAATCAGATGTTTGATGATTGTTGGTCTTTGGTGTACTCACCCTGACTGTAACAATAGGCCTTCAATAAGGCAAGCAATTCAAGTGCTTAACTTTGAAGCTCCACTGCCTAGTCTTCCATCAAGTTTGCCTGTACCGACATATATTGAGCTTCCAATGTGGTCATCCTCAGCCCCTTCCAGTACCAATACTTCAGAGGTAGGCCAAAACCAGAACATAAGCTTTATTGCCAACGCAAACTCTTCTGGGTTAACTGTAACTTCTGATCATGTTTCCCCTTCCAAGTCACTTTTGTACAATAGCTAA 2085 0.4225 METSHYKSKTYLLPCLAITKLILFLILTRATPITFNYRQFHDKDETLNYVGDVYQKNGVLQLTRIFLWDTYTMPMVLHFKFGSGSKERQKQDRTDYGAEHWIGCINWWFMLSLASHMEAEVKMVEWVWEPYGMGNLTVDRKLFGDFYEQELERLMTVGLWSIHPDYILIPNIRQMIRNAEQGFRLLDLAAYRELEYDVEQPQMKCLMNVGFSFPSFDPNDKNIAYEGSASCVAQSIQLTRNRQDPALTASAGRATYHQPIRLWDKTTGNLTDFTTYFTFAISSENDRYGDGMAFFLAPADSKMPNVTKGGFDNGTAVQQHLHATVDLRDYLPERVTFGFSAATGNRSAIHKINSWNLTSTLEDFTNSAAGQRRNRSTTGLAVGLGTGGFALICGLCLILLGMWKRGKKNMETDDHEFDEYMNENFERGTGPRKYSLDMHLFKNQGLLTWSVRCKIAQGLASALLYLHEEWEQCVLHRDIKSSNIMLDSNFNAKLGDFGLARLVDHAKGSQTTALAGTMGYMAPESVITGRASKESDVYSFGVVALEIACGRKPINYKAPENEINIVEWVWGLYGSGRILEAADPRLSGDFDEQQIRCLMIVGLWCTHPDCNNRPSIRQAIQVLNFEAPLPSLPSSLPVPTYIELPMWSSSAPSSTNTSEVGQNQNISFIANANSSGLTVTSDHVSPSKSLLYNS 694
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi03g0982 694 SUPERFAMILY Concanavalin A-like lectins/glucanases 209 361 IPR013320 -
Glsi03g0982 694 ProSiteProfiles Protein kinase domain profile. 300 632 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi03g0982 694 PANTHER - 434 630 - -
Glsi03g0982 694 Gene3D Transferase(Phosphotransferase) domain 1 432 644 - -
Glsi03g0982 694 ProSitePatterns Legume lectins alpha-chain signature. 331 340 IPR000985 -
Glsi03g0982 694 SUPERFAMILY Protein kinase-like (PK-like) 435 649 IPR011009 -
Glsi03g0982 694 ProSitePatterns Serine/Threonine protein kinases active-site signature. 474 486 IPR008271 GO:0004672|GO:0006468
Glsi03g0982 694 SMART serkin_6 376 623 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi03g0982 694 FunFam Lectin-domain containing receptor kinase A4.3 432 643 - -
Glsi03g0982 694 Pfam Legume lectin domain 210 307 IPR001220 GO:0030246
Glsi03g0982 694 Pfam Legume lectin domain 317 362 IPR001220 GO:0030246
Glsi03g0982 694 Gene3D - 313 371 - -
Glsi03g0982 694 Gene3D - 207 312 - -
Glsi03g0982 694 Pfam Protein kinase domain 442 621 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi03g0982 Glsi-ChrGlsi03 64625030 64632113 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi03g0982 415 641 Receptor kinase-like Gene Family AT5G10530 64.655 8.66e-94 302
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Glsi03g0982 Pkinase 1.8e-27 CL0016