Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi03g0980 ATGATCGATGTGGCATCTGCATTGGAGTATCTTCATCATGGTTCTTCAACACTTGTGGTTCATTGTGATGTGAAGCCAAGTAATGTTTTGTTGGATGAAGATATGGTGGCTCATCTTACTGATTTTGGTGTTGCCAAACTATTGGGTGAAGGGCAATTTGAAATTCATACAAAGACATTGGCAACTCTTGGCTATATTGCACCAGAGTATGGATCTAAAGGAATTGTTTCCATGAAAGGAGATGTGTACAGCTATGGTATTTTGCTAATGGAAATGTTTACAAGGAAAAAGCCAACAGATGACATGTTTACTGAAGGATTAATTGCCTTAGCACTTGGATTTCTTGTTCCATGGCCTGTTGCCAGTGAGAAGCTTCTAGCCCGGCGTTGA 390 0.4026 MIDVASALEYLHHGSSTLVVHCDVKPSNVLLDEDMVAHLTDFGVAKLLGEGQFEIHTKTLATLGYIAPEYGSKGIVSMKGDVYSYGILLMEMFTRKKPTDDMFTEGLIALALGFLVPWPVASEKLLARR 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi03g0980 129 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 1 107 - -
Glsi03g0980 129 ProSiteProfiles Protein kinase domain profile. 1 129 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi03g0980 129 ProSitePatterns Serine/Threonine protein kinases active-site signature. 19 31 IPR008271 GO:0004672|GO:0006468
Glsi03g0980 129 Gene3D Transferase(Phosphotransferase) domain 1 1 121 - -
Glsi03g0980 129 SUPERFAMILY Protein kinase-like (PK-like) 1 119 IPR011009 -
Glsi03g0980 129 Pfam Protein kinase domain 2 100 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi03g0980 Glsi-ChrGlsi03 64473200 64475724 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi03g0980 2 103 Receptor kinase-like Gene Family AT5G20480 55.556 4.60e-34 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Glsi03g0980 Pkinase 2.7e-24 CL0016