Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi03g0967 ATGGAGAACTATTCATATCCTTCATATCCAGATTCGGGTGATTCCTCTCCACGCTCTAGAGAGATCGACTTTGAGAACCCACCGCCGTGGGATGATCAGCAACCGCCGCCAAATTACAAAGCTAAATTTATGTGCAGCTATGGCGGCAAGATCCAACCCCGAAGCCATGACAACCAGCTCTCCTACGTCGGCGGCGAGACCAAGATCCTCGCTGTTGACCGGAACATCAAGTTTCTCGCCATGATTTCCAAGCTCTCTGCCATCTGCGATGGCGAAGTCACCTTCAAGTACCAGCTTCCTGGTGAAGATCTCGACGCTTTGATATCCGTTACCAACGACGATGATCTCGAGCACATGATGCATGAGTATGACCGTCTCTTCCGAGCTTCAGCTAAGCCGGCTCGGATGAGGCTCTTCCTTTTCCCCCTCAATAACGCGCCGGCGAGTTTTGGGTCTGATCGGGATCGCTTCGTCGAGGCTCTCAACACTGGTCCAGCTTCGGTTCCACCCGACCCCGTTAAGCCTGCGCCTGTACCTGGCAGCAACGTGGACTTCCTCTTTGGTCTCGAGAAGGGGGCGGTTCCTCATCAGGCTCAGCCACCACCCGCAGCCGTGAAATTTCATGATCCGGTGCCAGAGGCAGTGGCGCCGCCGCCGCCTCCGCCTGAGTACCAAGTACGAGGAGCTGTAAACCCGGGAGAACGTGTCATGGGTTCGGATCCGAATGCAAATCCGCATGAGATTCAGAGGCAATTGCAACAGGAGATGCAGCGATTTCAAATTTCGGATCATGATCAAGCTGTGTATAGGAGAAAAAGCGAAGACAATCAAGTCGGAGGCTACGCTGTCGCCGGAGATTATCTCGTACAGAAGTTGCCTGAAAAAGCTCCTGTATCTAATTTTCCGGCAGCAGCACCACCTCCCGCGGGTTATTGGCCGGAAAAGCATGTTTCTGTAGAGGGTTTACCGGCGATGGTGTCGACCGCACCAGGAGGAGCAGAGCAACAAGTTTACGTAATCCCTGCACCGGGAACCTTCTACCATGCCCCGATGGTGCGTCCCTCAACGGCACCAGCCACTCAAGGGTACTACGCAGTGCAGAGAATGGCTTCCGACGGCTACCGCGAACAGCAGGTCTACGGCGGCGTGCAACATCCAAAAGCGCCATTTTCGTCGGCGGCTCCGGGGACCATGGCACCGGCACAGCCGGTTAAACATTCCACTCCCTATACAGAAGGATATAGTATGGTTCGACCAGCAGGGATGCCGGATACCACGGCGGCGGCTGCTGCGTACGCACAGGTGGCGTATGATAGTGCAGGTGGTAGACAGGTTTACTATACAGCGCCGGGTGGTGTCATGCACGCGCCACCCTACCAAGGAGTTGCTCCGCCAGTAGGCGCTGACATGAGACAAGTTGGGGTGACATTGGGTCAAGATGGTAAAGTGATAAACAAGGTATCCCAAGGTTCAGTGTGA 1479 0.5497 MENYSYPSYPDSGDSSPRSREIDFENPPPWDDQQPPPNYKAKFMCSYGGKIQPRSHDNQLSYVGGETKILAVDRNIKFLAMISKLSAICDGEVTFKYQLPGEDLDALISVTNDDDLEHMMHEYDRLFRASAKPARMRLFLFPLNNAPASFGSDRDRFVEALNTGPASVPPDPVKPAPVPGSNVDFLFGLEKGAVPHQAQPPPAAVKFHDPVPEAVAPPPPPPEYQVRGAVNPGERVMGSDPNANPHEIQRQLQQEMQRFQISDHDQAVYRRKSEDNQVGGYAVAGDYLVQKLPEKAPVSNFPAAAPPPAGYWPEKHVSVEGLPAMVSTAPGGAEQQVYVIPAPGTFYHAPMVRPSTAPATQGYYAVQRMASDGYREQQVYGGVQHPKAPFSSAAPGTMAPAQPVKHSTPYTEGYSMVRPAGMPDTTAAAAAYAQVAYDSAGGRQVYYTAPGGVMHAPPYQGVAPPVGADMRQVGVTLGQDGKVINKVSQGSV 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi03g0967 492 MobiDBLite consensus disorder prediction 1 37 - -
Glsi03g0967 492 MobiDBLite consensus disorder prediction 1 15 - -
Glsi03g0967 492 SUPERFAMILY CAD & PB1 domains 56 146 - -
Glsi03g0967 492 Gene3D - 61 142 - -
Glsi03g0967 492 CDD PB1_UP2 44 141 - -
Glsi03g0967 492 PANTHER OS05G0427100 PROTEIN-RELATED 9 358 - -
Glsi03g0967 492 SMART PB1_new 55 143 IPR000270 GO:0005515
Glsi03g0967 492 Pfam PB1 domain 56 142 IPR000270 GO:0005515
Glsi03g0967 492 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 60 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi03g0967 Glsi-ChrGlsi03 63833945 63835423 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi03g0967 39 163 MAP Kinase Kinase Kinase AT5G57610 44.853 6.52e-29 119