Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi03g0958 ATGAGTGATGGAGCTGGTTTGGTTCAATTCATGAGTGCGTTGCGAGAAATAGCCCGCGGTGCGCGTGAGCCTTCACTTCCACCGGTGTGGCGGAGGGAGCTTCTAAACGCAAAAGACCCACCGCGCGTAACATGCACGCATCGAGAATACGAGGAAGTGCCTGATACTAAGGGAACGATCATCCCTCTAGACGACATGGTCCATCGTTCTTTCTTCTTTGGACCAAATGAAATAGCTGCGATTCGCGCTTCCATTCCTCACACAGACGAAGAAGTCCGCATAATTTGCATTGTCAACGCACGCAGCAAGTTTAACCCTCTGCTGCCAAAGGGTTATTATGGCAACGCTTTTGCGTTTCCGGTGGCAGTGACCACCGCGGCAAAATTATGTGAGAAGCCATTGGGGTACGCTTTAGAGTTAGTGAAGAAAGCAAAAGGTGATGTGACCGAAGAGTACATGCATTCTTTAGCCGATCTGATGGTGATTAAGGGAAGACCTCACTTCACGGTGGTGAGGTCCTACCTTGTGTCAGATGTGACACGTGCTGGATTCGGAGAGAATGCTAAAGGAGAAGAAGGCTTGGTAATACCGATTTGTTTACCAGCTGAAGCCATGGAGAGATTTGAGAAGCACTTGGGTAGCGTGCTAAAGAACTGTTCTCAAAATTCTAAATTTATCATATCTTCGTTATAA 693 0.4762 MSDGAGLVQFMSALREIARGAREPSLPPVWRRELLNAKDPPRVTCTHREYEEVPDTKGTIIPLDDMVHRSFFFGPNEIAAIRASIPHTDEEVRIICIVNARSKFNPLLPKGYYGNAFAFPVAVTTAAKLCEKPLGYALELVKKAKGDVTEEYMHSLADLMVIKGRPHFTVVRSYLVSDVTRAGFGENAKGEEGLVIPICLPAEAMERFEKHLGSVLKNCSQNSKFIISSL 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi03g0958 230 Gene3D - 1 52 IPR023213 -
Glsi03g0958 230 Pfam Transferase family 84 186 - -
Glsi03g0958 230 Pfam Transferase family 1 81 - -
Glsi03g0958 230 Gene3D - 56 214 IPR023213 -
Glsi03g0958 230 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 1 208 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi03g0958 Glsi-ChrGlsi03 63539068 63539935 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi03g0958 2 163 Monolignol Biosynthesis Gene Families AT5G48930 24.242 4.07e-12 63.2