Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi03g0953 ATGAGTGATGGAGCTGGTTTGGTTCAATTCATGAGTGCGTTGCGAGAAATAGCCCGCGGTGCGCGTGAGCCTTCACTTCCACCGGTGTGGCGGAGGGAGCTTCTAAACGCAAGAGACCCACCGCGCATAACATGCACGCATCGAGAATACGAGGAAGTGCCTGATACTAAGGGAACGATCATCCCTCTAGACGACATGGTCCATCGTTCTTTCTTCTTCGGACCAAATGAAATAGCTACGATTCGCGCTTCCATTCCTCGTAATTTAAGTCAGTGTTCTAATTTTGAGATTGTTACTGCATATCTATGGCGTTGCCGGATGATGGCGTTGCAACCAGACACAGACAAAGAAGTCCGCATAATTTGCATTGTCAACGCACGCAGCAAGTTTAACCCTCCGCTGCCAAAGGGTTATTATGGCAACGCTTTTGCGTTTCCGGTGGCAGTGACCACCGCGGGAAAATTATGTGAGAAGCCATTGGGGTACGCTTTAGAGTTAGTGAAGAAAGCAAAAGGTGATGTGACCGAAGAGTACATGTATTCTTTAGCCAATCTGATGGTGATTAAGGGAAGACCTCACTTCACGGTGGTGAGGTCCTACCTTGTGTCAGATGTGACACGTGCTGGATTCGGAGAGGTGGATTTTTAG 648 0.4846 MSDGAGLVQFMSALREIARGAREPSLPPVWRRELLNARDPPRITCTHREYEEVPDTKGTIIPLDDMVHRSFFFGPNEIATIRASIPRNLSQCSNFEIVTAYLWRCRMMALQPDTDKEVRIICIVNARSKFNPPLPKGYYGNAFAFPVAVTTAGKLCEKPLGYALELVKKAKGDVTEEYMYSLANLMVIKGRPHFTVVRSYLVSDVTRAGFGEVDF 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi03g0953 215 PANTHER ACYL TRANSFERASE 4 1 215 - -
Glsi03g0953 215 Gene3D - 1 50 IPR023213 -
Glsi03g0953 215 Gene3D - 51 215 IPR023213 -
Glsi03g0953 215 Pfam Transferase family 1 215 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi03g0953 Glsi-ChrGlsi03 63168203 63168850 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi03g0953 2 189 Monolignol Biosynthesis Gene Families AT5G48930 26.904 1.41e-18 81.6