Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi03g0948 ATGGAAGCGAACGAGAAATGTGATGTTTACAGTTTTGGAGTTTTGGTTTTAGAAATAATTATGGGAAAGCATCCAAGAGATCTCATAATATCCTTTTTCTCGTCAACCTCTTCTATGGCAGCAGTAGTGTCATCAAAAGGCCATAATTTATCATTAAAGGATGTATTGGACCAAAGGCTTCCTTATCCTATGAACTCAGTTTCCGAGGAGGTGATCTTGATTGCAAGAATAGGATTTGCTTGCTTAAATGAAAGTCCGCGTGCTCGTCCAACCATGGAGAGATTATGTAAGGATCTTGTCATGTCGAAATCACCTCTTTTGGTTCCATTCGACAATATCATACTAGGAGATCTCTACTGA 360 0.3889 MEANEKCDVYSFGVLVLEIIMGKHPRDLIISFFSSTSSMAAVVSSKGHNLSLKDVLDQRLPYPMNSVSEEVILIARIGFACLNESPRARPTMERLCKDLVMSKSPLLVPFDNIILGDLY 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi03g0948 119 PANTHER LEUCINE RICH REPEAT KINASE 2 1 104 - -
Glsi03g0948 119 Gene3D Transferase(Phosphotransferase) domain 1 1 105 - -
Glsi03g0948 119 SUPERFAMILY Protein kinase-like (PK-like) 3 107 IPR011009 -
Glsi03g0948 119 Pfam Protein tyrosine and serine/threonine kinase 3 99 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi03g0948 Glsi-ChrGlsi03 62929408 62929767 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi03g0948 5 99 Receptor kinase-like Gene Family AT1G25390 34.375 7.51e-12 58.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Glsi03g0948 PK_Tyr_Ser-Thr 3.4e-06 CL0016