Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi03g0946 ATGGCCCCAACATCACCTCCCTCTCTACTATTTACAGTGCGGCGGAGCAAACCGGAGCTTGTTTCTCCGGCGAAGCCCACGCCTCGTGAGGTTAAGCTACTCTCAGACATTGATGACCAAGAAGGTCTCCGTTTTCAAATCCCAGTGATACAGTTCTATCGCTATGACCCGTCCATGGCAGGGAAAGACCCTGTTGAGGCCATCAGAAAGGCACTGGCAGAAACTCTGGTGTTTTACTACCCATTTGCCGGTAGGCTCAGGGAAGGTCCTGATCGGAAGCTCATGGTGGATTGCAATGGGGAGGGTGTTCCTTTCATTGAGGCTGATGCAGATGTGAGGCTGGACCAATTCGGTGATGCTCTTCAACCTCCATTCCCTGGCTTGGAAAAGCTTCTTTACGATGTTCCAGGGACTCAACCAGTTCTCAACACTCCCCTCCTGCTTATACAGGTAACGCGACTCACATGCGGTGGTTTCATCTTTGCTCTCCGCCTCAATCACACCATGAGTGATGCAGCTGGTTTGGTTCAATTCATGAGTGCGTTGGGAGAAATAGCACGCGGTGCGCGTGAGCCTTCAACTCCACCGGTGTGGCGCAGGGAGCTTCTAAACGCAAGAGACCCGCCGCGCGTAACATGCACGCATCGAGAATACGAGGAAGTGCCTGATACTAAGGGAACGATCATCCCTCTAGACGACATGGTCCATCGTTCTTTCTTCTTCGGACCAAATGAAATAGCTGCGATTCGCTCTTCCATTCCTCGTAATTTAAGTCAGTGTTCTGATTTTGAGATTATTACTGCATATCTATGGCGTTACCGGACGATGGCGTTGCAACCAGACGCAGACGAAGAAGTCCGCATAATTTGCATTGTCAACGCACGCAGCAAGTTTAACCCTCCGCTGCCAAAGGGTTATTATGGCAACGCTTTTGCCTTTCCGGTGGCAGTGACCACCGCGGGAAAATTATGTGAGAAGCCATTGGGGTACGCTTTAGAGTTAGTGAAGAAAGCAAAAGGTGATGTGACCGAAGAGTACATGCATTCTTTAGCCGATCTGATGGTGATTAAGGGAAGACCTCACTTCACGGTGGTGAGGTCCTACCTTGTGTCAGATGTGACACGTGCTGGATTCGGAGAGGTAGATTTTGGGTGGGGGAAGCCCGTGTATGGTGGACCAGCCAAGGGAGGAGTGGGAGCCATTCCTGGGGTGGCAAGCTTTTATATACCATTTAAGAATGCTAAAGGAGAAGAAGGCTTGGTAATACCGATTTGTTTACCAGCTGAAGCCATGGAGAGATTTGAGAAGCACTTGGGTAGCGTGCTGAAGAACTGTTCTCAAAATTCTAAATTTATCATATCTTCGTTATAA 1371 0.4953 MAPTSPPSLLFTVRRSKPELVSPAKPTPREVKLLSDIDDQEGLRFQIPVIQFYRYDPSMAGKDPVEAIRKALAETLVFYYPFAGRLREGPDRKLMVDCNGEGVPFIEADADVRLDQFGDALQPPFPGLEKLLYDVPGTQPVLNTPLLLIQVTRLTCGGFIFALRLNHTMSDAAGLVQFMSALGEIARGAREPSTPPVWRRELLNARDPPRVTCTHREYEEVPDTKGTIIPLDDMVHRSFFFGPNEIAAIRSSIPRNLSQCSDFEIITAYLWRYRTMALQPDADEEVRIICIVNARSKFNPPLPKGYYGNAFAFPVAVTTAGKLCEKPLGYALELVKKAKGDVTEEYMHSLADLMVIKGRPHFTVVRSYLVSDVTRAGFGEVDFGWGKPVYGGPAKGGVGAIPGVASFYIPFKNAKGEEGLVIPICLPAEAMERFEKHLGSVLKNCSQNSKFIISSL 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi03g0946 456 Pfam Transferase family 14 437 - -
Glsi03g0946 456 Gene3D - 219 440 IPR023213 -
Glsi03g0946 456 Gene3D - 9 218 IPR023213 -
Glsi03g0946 456 PANTHER ACYL TRANSFERASE 4 11 439 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi03g0946 Glsi-ChrGlsi03 62840869 62843749 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi03g0946 20 438 Monolignol Biosynthesis Gene Families AT5G48930 30.435 1.01e-53 184