Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi03g0891 ATGACTATGGCGTTATCTGCACATGTCGTGGGGATGAGGTTCCTTCCCACGGACGAAGAACTCCTTCAGTATTACCTGTACAGAAAGATTACAGGAAAATCATTACCAGAAAATATTATTCTTGAGGTTGATCTTTATGGGACTAAAAACCCATGGCAAATTTGGGAAATTTATAGTGAAAACACAGTGAAGGTGGGGGAAGATGAAGATTTGTACTTCTTCACCATGCTGAAGAGGAAAAATACCAAAGCTAAGCGAGTTGAGCGAAAAGTGGGGATAGGATCATGGATGGGAGAAGATGCTGGGAAGAAGATAATGGGTGATGGAAAATGCATTGGGACAAAGAAGAGGCTTCGGTTTGAGAATAGCAGAACGGATCATGACGGTGGTTGGATCATGCACGAGTTTTCTCTTGATCATTCTTTACTTCCTCCTGGTTTCCAAAATGACTATGTTCTTTGTCGGATGAGGAAGAATTCTGATAAAATTACAAAAAATCTGAACAAGAGAAAAGTGTTACGGACATCTCCTGAGTTGGAGTTAAGCCCAAAAAAGCTGCAAAAGAAAACTGAATTGGAGAAAAATTATATTGACTCAGAGAATGCTCTATCAATCTTTTGTAATGTAGCATCAGTTTCAAATGAACCAGATCAACAACTTCAATTTGGAGGAAAGAAAGAAAGGGGCGTTGAGTCAGAGAAGAAGGAAGAGGATCCCTACCTACAAATACTTTTTGGTGAAGAAGACATTGTTGGTCCTATAACACTAGAGGACCAAAAACTTTATGTTAGAGAAGAGACGTTTCAGCTTGAAAACTACTACAACGCTTGGGTTGAATCATTATTGAAGATCTAG 855 0.3918 MTMALSAHVVGMRFLPTDEELLQYYLYRKITGKSLPENIILEVDLYGTKNPWQIWEIYSENTVKVGEDEDLYFFTMLKRKNTKAKRVERKVGIGSWMGEDAGKKIMGDGKCIGTKKRLRFENSRTDHDGGWIMHEFSLDHSLLPPGFQNDYVLCRMRKNSDKITKNLNKRKVLRTSPELELSPKKLQKKTELEKNYIDSENALSIFCNVASVSNEPDQQLQFGGKKERGVESEKKEEDPYLQILFGEEDIVGPITLEDQKLYVREETFQLENYYNAWVESLLKI 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi03g0891 284 Gene3D NAC domain 17 165 IPR036093 GO:0003677|GO:0006355
Glsi03g0891 284 PANTHER NAC TRANSCRIPTION FACTOR 56 10 188 - -
Glsi03g0891 284 Pfam No apical meristem (NAM) protein 10 138 IPR003441 GO:0003677|GO:0006355
Glsi03g0891 284 ProSiteProfiles NAC domain profile. 8 159 IPR003441 GO:0003677|GO:0006355
Glsi03g0891 284 SUPERFAMILY NAC domain 6 158 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi03g0891 Glsi-ChrGlsi03 61569623 61570968 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi03g0891 3 158 NAC Transcription Factor Family AT5G17260 37.267 9.97e-25 101
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Glsi03g0891 NAM 4.5e-25 No_clan