Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi03g0886 ATGGGTAAGGTTTGGCTTTCGTTAAAGAGAACGATTAAGTGTAAGCTGCGTCCTTCAGAAGTTCATGATCCAAAGGAAAGTAAGCAACAAAAAAATGCGGAGAGAAAAGAGAAACTGGAAAATTGCAGTCCAAAATTGAAAGGGAGAAGTGACATCCTTAATCCCATAACCCATGAAGTTGTGCTTGATAGCTCAAATGGTGAAATTAGCATTTGCCCATGTTGTCCATTTCCTCAAAGTGATCATAGAAGCAGTAAATGTGGGGAAGGCCCTCATAAATCAACAAGGCCAAATACACCTTCAAGGAAAAGCGACCATGTTGACTGCATTGAATGCAATATCTCCTCAAGCCCAAGGATTTTGTCGCAGACAGATCCTGGTTATCCTTTATCTTCAAATTGTCACAAATGTGGGCAGAAACTTAAAAATCTTGATGCCATTGAAGCACACCATATCTCTGAGCATTCAGTTACTGAACTTGATAAAGAAGAATCATCCAGGCAGATCATTGAAACCATATGCCAAACGAACTGGAAGAATTCAGAAAACAAGTCAAGACAGAAGATTGAAAGTGTCTTGAAAGTGCAGAACACGCATAAAACCTTTGCTCGCTTCGAGGAATGCAGAGAAGTAATAAAGATAAATGCTGATAAGCTACAGAAGAAGCACCCCCGTTGCCTGGCTGATGGAAATGAACTTTTAAGGTTCCATGGCACAACTCTTGCATGCCCTCTGGGTTTGAATGGCTCTTCTTTCTCTTGTAGCCTCTGTACTTCAGACCATTGTGGCCTGTGTCAAATTCTGAGGCATGGGTTCTCCGCCAACTGGGAATTCCATGGTGCATTAGGGGTTTTTACCACTTCCACAAGTGCAAAAGCCTTGGACTCCATTGGTTCATCTTATGAGAGACCATCTATGAGGAAGTGTGTAATAGTGTGCAGGCTAGTAGCTGGGAGAGTCCACAGTCCTCTTAAAGAAATCAAAGAAATGGATGATTCAGGGTTTGATTCATTGGCAGGGAAAATGAACTGCCATTCATCAGATTATGAGGAACTCTATGTGTTAAATCCTAGAGCTCTCCTCCCTTGTTTTGTGGTGATTTACAAACCCTGA 1113 0.4178 MGKVWLSLKRTIKCKLRPSEVHDPKESKQQKNAERKEKLENCSPKLKGRSDILNPITHEVVLDSSNGEISICPCCPFPQSDHRSSKCGEGPHKSTRPNTPSRKSDHVDCIECNISSSPRILSQTDPGYPLSSNCHKCGQKLKNLDAIEAHHISEHSVTELDKEESSRQIIETICQTNWKNSENKSRQKIESVLKVQNTHKTFARFEECREVIKINADKLQKKHPRCLADGNELLRFHGTTLACPLGLNGSSFSCSLCTSDHCGLCQILRHGFSANWEFHGALGVFTTSTSAKALDSIGSSYERPSMRKCVIVCRLVAGRVHSPLKEIKEMDDSGFDSLAGKMNCHSSDYEELYVLNPRALLPCFVVIYKP 370
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Glsi03g0886 370 SUPERFAMILY ADP-ribosylation 157 369 - -
Glsi03g0886 370 MobiDBLite consensus disorder prediction 83 103 - -
Glsi03g0886 370 ProSitePatterns Zinc finger C2H2 type domain signature. 134 155 IPR013087 -
Glsi03g0886 370 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 4 368 - -
Glsi03g0886 370 Gene3D - 156 369 - -
Glsi03g0886 370 MobiDBLite consensus disorder prediction 85 103 - -
Glsi03g0886 370 MobiDBLite consensus disorder prediction 17 41 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Glsi03g0886 Glsi-ChrGlsi03 61528130 61530546 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi03g0886 4 370 C2H2 Transcription Factor Family AT5G54630 41.009 4.63e-100 303