Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi03g0871 ATGGATTATGCAGATGAAGATGGGTTATGTGCTACTCTTGACAAGTTATGTGACTTTACTGAAAGTAGAAGCGTCAGGGGAAGAATGAGCAGGAAGAGGAACAATGATGATGACACGAGAGAGTACAAATCCAAGAACCTCGAAACTGAAAGGAGAAGAAGGGAGAAGCTCAGTAGCAGACTGTTGATTCTGCGATCTTTAATGACTAAAGCAACCATTATTGAAGATGCTATCACCTACATTAAAAATCTGCAAGATGAAGTCGAGAGTCTCACCCAAGAGCTTCACGAAATGGAAGCGAATTCAGAGAAAACAGCAGAGTCAAAGACAGATAAAATAGATGCAGCAGAAGAGATGAAGAAAAGTGGGATACAGGCAGAGGTCAAAGTGACACAAATAGATGGGAATAAGCTCTGGATGAAGATCATTATTGAGAAGCAAAAGGGTAGGTTTAAGAAATTGATAGAGACCATGAGTGCTTTTGGCATTGAACTCATAGACACCAATGTTACTACCACAAAAGGAGCATTCCTAATTGCAACCTGCATACAGGTGATTTCAAGACCTACTAGTAGTATTTACAGTAATATCATTCAGCCCCATGTGAAGAGCCTCAAAGATGATAATCGATTCTTCTTGGTGCTGTAA 648 0.3997 MDYADEDGLCATLDKLCDFTESRSVRGRMSRKRNNDDDTREYKSKNLETERRRREKLSSRLLILRSLMTKATIIEDAITYIKNLQDEVESLTQELHEMEANSEKTAESKTDKIDAAEEMKKSGIQAEVKVTQIDGNKLWMKIIIEKQKGRFKKLIETMSAFGIELIDTNVTTTKGAFLIATCIQVISRPTSSIYSNIIQPHVKSLKDDNRFFLVL 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi03g0871 215 Gene3D - 38 111 IPR036638 GO:0046983
Glsi03g0871 215 MobiDBLite consensus disorder prediction 25 51 - -
Glsi03g0871 215 Coils Coil 74 108 - -
Glsi03g0871 215 SMART finulus 47 90 IPR011598 GO:0046983
Glsi03g0871 215 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 38 99 IPR036638 GO:0046983
Glsi03g0871 215 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 29 205 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi03g0871 28 184 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G21330 45.402 3.56e-41 137