Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi03g0867 ATGGCTGAGGAGTTTCAAGCTGCAGGAATTTGTGGTGGGAACTGGTGGAATATTAATCCTACAAGAGGTGTTTTCCCTCTGAGCTCTTCGTCTCCCTGTTCTATGGCAGCTAATGATGCTGCAGGGAGCAACTACAGCACCTGGCAAAATGATTTGGTGGATTTGAAGGTAACAAGATCTTGTGCTGATGATGAGGAGACTAATAATAGTCTGGTTTCTGATAGCTCTCTGGGTTTTCTTGATGCAACGAAGCATCAACAGAGTGAATCAGCCAGTGGAAACGGCAGCATCTTTATCGATTCCACCTTACAAATGATGGGTTTTGGCCTCTCATCATCTTCAGCTTCTTCGAATTGGAATCATTCTCTATTCAGTCGTTGTAGTGGAAGACCAGAGAGCAATTTCCATTCTGTGCTTCAAGAGGAAAAAGGCATAGATTCTTCTAATTCACCAACGACCCAAAAAGATTGGAGACAAAAGAGCTTCTCATCTGGTGGTGGAGGCCAAGTTTCGACCATTAATGATGCTTTTAAGCAAATGAACCAAGAACTCTCCTTAGATCATCATCAGCAGAGTCTGAGTTCTGTAACTAGCACTGGGAATTCAGCAGTGACTTGTCAAGGTTTATCATCAGGTGGTTTCCCAATTGGATCAGCCTCTTATGGGTACCCATCAACGTTGATACAAAGCCTATATGACCCTGATATTCCTCAGCCACAGCACTCGCTTTTCACCAACCGGTCTGCCTATTCATCATGTACAACAAATTATATTGGGACAACGTCCAACGAACTGTCACCAACTAATTGGTCCAAAGCCTCTGATCCCTTTTTGAAACCCTCTATGCCAAAGCAGCAGCAACAGCCTAGTGGGCTGCACTTTTCCAACAACACTCCTTTCTGGAATGCTTCAGCGGAGGGATTAAATGACATAAGAGCAGGTGTTTTTACGCCATCACAAGCACAATATCAAACTTCAACATTAATTAATGAGAAACCTAGTTTCCCAAGTGCTCTCCTAAGTACCAAGCCCAAGACTGAAGAAGCTCCGAACTCGGCATCGGTGGTGAAGAAAAGTGTTTGTGAACCTGGATTAAAGAGGCAAAGAATTGAAACCCCATCGCAATTACCAACTTTTAAGGTTCGGAAAGAGAAGCTAGGAGACCGAATCACTGCTCTTCAGCAACTGGTTTCACCTTTCGGAAAGACTGATACAGCATCTGTTCTTCACGAAGCCATCGAGTACATCAAGTTCCTTCATGATCAAGTCAGTGTTTTGAGCACTCCATATATGAAAAATGGAGCTCCCATCCAACAGCAGCAGTTGAAGGGTTGCGATCTGAAGGACTCAGAAGGGCCAAAACAAGATCTGAGAAGCCGAGGGCTATGCTTGGTACCGATTTCAAGCACATTCCCAGTGACTAATGAGACCACTGCTGATTTTTGGACGCCTGCATTTGGAGGCGCACTCATAAGGTAG 1479 0.4442 MAEEFQAAGICGGNWWNINPTRGVFPLSSSSPCSMAANDAAGSNYSTWQNDLVDLKVTRSCADDEETNNSLVSDSSLGFLDATKHQQSESASGNGSIFIDSTLQMMGFGLSSSSASSNWNHSLFSRCSGRPESNFHSVLQEEKGIDSSNSPTTQKDWRQKSFSSGGGGQVSTINDAFKQMNQELSLDHHQQSLSSVTSTGNSAVTCQGLSSGGFPIGSASYGYPSTLIQSLYDPDIPQPQHSLFTNRSAYSSCTTNYIGTTSNELSPTNWSKASDPFLKPSMPKQQQQPSGLHFSNNTPFWNASAEGLNDIRAGVFTPSQAQYQTSTLINEKPSFPSALLSTKPKTEEAPNSASVVKKSVCEPGLKRQRIETPSQLPTFKVRKEKLGDRITALQQLVSPFGKTDTASVLHEAIEYIKFLHDQVSVLSTPYMKNGAPIQQQQLKGCDLKDSEGPKQDLRSRGLCLVPISSTFPVTNETTADFWTPAFGGALIR 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi03g0867 492 MobiDBLite consensus disorder prediction 142 172 - -
Glsi03g0867 492 Gene3D - 380 443 IPR036638 GO:0046983
Glsi03g0867 492 FunFam Transcription factor bHLH123 family 380 442 - -
Glsi03g0867 492 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 370 419 IPR011598 GO:0046983
Glsi03g0867 492 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 380 437 IPR036638 GO:0046983
Glsi03g0867 492 CDD bHLH_AtbHLH_like 375 427 IPR045239 -
Glsi03g0867 492 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 131 472 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi03g0867 Glsi-ChrGlsi03 60767975 60770365 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi03g0867 1 492 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G61660 38.462 1.36e-69 226