Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi03g0862 ATGAACATCTTTTCTGCTAAAGAGCTTCTGATCAGACCTTTATTGTTTCTCTTCCTTCTTCAGTCTTCTTGTCACTCCCTTGACAGCATAACCCCAGAACATCCCCTCAAAGACGGCGACGTTTTGGTTTCCAACAGTACAACCTTTGCACTTGGTTTCTTCAGCCCCGGAAATTCCAGAAACCGCTATGTTGGGATTTGGTACAACAGAGTTTCAGACCAAACAGTTGTGTGGGTTGCTAACAGAGACAGTCCTTTGACTGATGCTGTTGGAGTTCTCTCCATCAACAGCCATGGGAACCTCGTCGTCCTCAACGACAAGAACCCAAATATCAACCCCATTTGGTCAGCTAACGTTTCGGCCTCATCTTCCAATACCTCGGCGAAGCTTCTAGATACAGGGAACTTGGTCTTAGTTGATAACGTTGGAAGCCAAAAGGTTCTCTGGCAGAGTTTTGATTATCCCTGTGATACTATGCTGCCGTTTATGAAACTCGGGTTGGACCGGAAAACTGGGTTGAACTGGTTCCTAACATCATGGAAATCTCCGAATGACCCAGGATTCGGGACCATGAGCTACAGGATCGATCCTACTGGCTATCCTCAGTTTTTCTTGTACAAGAACAGTTCTCCACTTTGGCGGGTCGGATCTTGGACGGGTCAAAGATGGAGCGGTGTACCCGAGATGACACCCAACTTCATCTTCAATGTTAGCTTTGTCAACAATGCCAGTGAAGTTACCATAATGTACGGAGTCAAGGACCCTTCCATTTTCACAAGAATGGTGCTGGAAGAAAACGGTATCGTGAGACGATCCACGTGGCAACCTCAGGAGCACAGATGGTTCGAAATTTGGAAAGGCCCGAAAGAGGATTGTGATAACTTCAGGCAGTGCGGGTCAAATAGTAATTGTGACCCGTATAATGCGGACAAGTTTGAGTGTGAGTGTCTACCCGGATTTGAACCCAAGTTCCCACGAGAATGGTATCTTAGAGACGGGTCGGGTGGGTGTGTGAGGAAGCCCAACGTGTCCACGTGTCGAAGTGGGGAGGGCTTTGTGAAGTTAGCAAGTGTGAAGGTGCCAGATACCACCAAGGCACGTGTGGATATGAGGCTGAGCCTGAAAGAGTGCAGGCAGAGGTGCCTGCAAGATTGTTCTTGTGCAGCCTATGCAAGTGCAAATGAGATCACAAGGACTGGGTGTTTGACATGGCACGGGGATATGGAGGATATTAGGACATATACACGTGTGGCACAAGATTTGTACGTGCGTGTAGATGGAGCTGAATTAGCTAAATATGCAAATAAGCGATATGGTTCTCTTGGCAAGAAGGGGATGGAGGCACTTTTAGTCATTTCTATTTTCCTGGTGTTGTTTCTGATAGCCTGTTTCGGGTATTGGTATGTAAAGAACAGGAAACAAGTGAACAGAAGGCAAAATAAATATTTGCTTGATTATAACTTCGAGGAATCTCCAAATTTAAATGACTTTGACAGTGGAAAAAATTCAGATTTACCACTCTTTGATCTAAGTGACATAGCTGCAGCAACAGAGAATTTTTCTACTGCGAACAAGCTTGGACAAGGCGGTTTTGGTTCTGTTTATAAGGGTGTTCTAAGTAATGGAATGGCAATAGCAGTGAAGAGACTGTCCAAGCATTCTGGACAAGGCATAGAAGAGTTCAAAAATGAGGTTGCTTTAATTGCAAAGCTTCAACATAGAAATCTTGTGAGGATCTTAGGTTGCTGCATTCAAGGAGAGGAGAAGATGCTTATCTATGAGTATCTACCAAACAAAAGCTTGGACTCCTTCATTTTTGATGAGGCAAAAAAGTTACAGTTAGACTGGAGGAAACGATTGGATATCATCTTCGGAGTCGCTAGAGGGATCTTATACCTCCATCAAGATTCGAGATTAAGAATCATTCATAGGGACTTGAAGGCCAGCAATGTCTTGCTAGACTCTGCATTGAACCCAAAAATTGCAGATTTTGGTATGGCTAGAATATTTGGTGGAGATCAAATCGAAGCAAACACAAATCGTGTTGTCGGAACTTATGGTTACATGTCACCAGAATATGCAATGGAAGGACTGTTTTCAATAAAATCTGATATATATAGCTTTGGAGTTGTACTTTTAGAGATTATTACTGGCAAAAAGAATAGTGGTCACTATGATGACATTACCTCAACTTTGGTTGGACATATTTGGGATCTATGGAAAGAAGGCAGAGCCATGGAGATTGTTGATCCGTCATTGGGTGAGTTATGCCCTGAACATGAAGTTCTGAAGTGCATCCAGATTGGGCTTCTATGTGTACAAGATCATGCAATAGACAGGCCAACTATGTCGGCAGTTGTTTCCATGTTGGGTAATGACTCACCTCTTTTTCCTCCAAAACAGCCTGCATTTATTTTCAAGAGAAGTACTTATGGAAGTTCAAACCCATCAACCAGTGATGGAATTAATTCAGTAAATGGGGTGAGTATTACTATGATTGAAGCTCGCTGA 2511 0.4345 MNIFSAKELLIRPLLFLFLLQSSCHSLDSITPEHPLKDGDVLVSNSTTFALGFFSPGNSRNRYVGIWYNRVSDQTVVWVANRDSPLTDAVGVLSINSHGNLVVLNDKNPNINPIWSANVSASSSNTSAKLLDTGNLVLVDNVGSQKVLWQSFDYPCDTMLPFMKLGLDRKTGLNWFLTSWKSPNDPGFGTMSYRIDPTGYPQFFLYKNSSPLWRVGSWTGQRWSGVPEMTPNFIFNVSFVNNASEVTIMYGVKDPSIFTRMVLEENGIVRRSTWQPQEHRWFEIWKGPKEDCDNFRQCGSNSNCDPYNADKFECECLPGFEPKFPREWYLRDGSGGCVRKPNVSTCRSGEGFVKLASVKVPDTTKARVDMRLSLKECRQRCLQDCSCAAYASANEITRTGCLTWHGDMEDIRTYTRVAQDLYVRVDGAELAKYANKRYGSLGKKGMEALLVISIFLVLFLIACFGYWYVKNRKQVNRRQNKYLLDYNFEESPNLNDFDSGKNSDLPLFDLSDIAAATENFSTANKLGQGGFGSVYKGVLSNGMAIAVKRLSKHSGQGIEEFKNEVALIAKLQHRNLVRILGCCIQGEEKMLIYEYLPNKSLDSFIFDEAKKLQLDWRKRLDIIFGVARGILYLHQDSRLRIIHRDLKASNVLLDSALNPKIADFGMARIFGGDQIEANTNRVVGTYGYMSPEYAMEGLFSIKSDIYSFGVVLLEIITGKKNSGHYDDITSTLVGHIWDLWKEGRAMEIVDPSLGELCPEHEVLKCIQIGLLCVQDHAIDRPTMSAVVSMLGNDSPLFPPKQPAFIFKRSTYGSSNPSTSDGINSVNGVSITMIEAR 836
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi03g0862 836 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 596 798 - -
Glsi03g0862 836 CDD STKc_IRAK 526 790 - -
Glsi03g0862 836 ProSiteProfiles PAN/Apple domain profile. 346 426 IPR003609 -
Glsi03g0862 836 SMART blect_4 33 155 IPR001480 -
Glsi03g0862 836 Gene3D Transferase(Phosphotransferase) domain 1 596 795 - -
Glsi03g0862 836 Gene3D Phosphorylase Kinase; domain 1 489 595 - -
Glsi03g0862 836 ProSitePatterns Serine/Threonine protein kinases active-site signature. 641 653 IPR008271 GO:0004672|GO:0006468
Glsi03g0862 836 CDD PAN_AP_plant 344 425 - -
Glsi03g0862 836 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 487 595 - -
Glsi03g0862 836 ProSiteProfiles EGF-like domain profile. 288 326 IPR000742 -
Glsi03g0862 836 CDD B_lectin 35 155 IPR001480 -
Glsi03g0862 836 SUPERFAMILY Protein kinase-like (PK-like) 504 804 IPR011009 -
Glsi03g0862 836 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 15 781 - -
Glsi03g0862 836 Gene3D - 23 152 IPR036426 -
Glsi03g0862 836 Pfam D-mannose binding lectin 75 181 IPR001480 -
Glsi03g0862 836 SMART ntp_6 347 425 IPR003609 -
Glsi03g0862 836 Pfam S-locus glycoprotein domain 213 324 IPR000858 GO:0048544
Glsi03g0862 836 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 22 152 - -
Glsi03g0862 836 SUPERFAMILY alpha-D-mannose-specific plant lectins 76 186 IPR036426 -
Glsi03g0862 836 ProSitePatterns Protein kinases ATP-binding region signature. 526 548 IPR017441 GO:0005524
Glsi03g0862 836 ProSiteProfiles Protein kinase domain profile. 520 797 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi03g0862 836 ProSiteProfiles Bulb-type lectin domain profile. 27 151 IPR001480 -
Glsi03g0862 836 Pfam Protein tyrosine and serine/threonine kinase 522 790 IPR001245 GO:0004672|GO:0006468
Glsi03g0862 836 PIRSF SRK 1 836 IPR024171 GO:0004674
Glsi03g0862 836 Pfam PAN-like domain 346 411 IPR003609 -
Glsi03g0862 836 SMART serkin_6 520 797 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi03g0862 836 Pfam Domain of unknown function (DUF3403) 794 836 IPR021820 GO:0004674
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi03g0862 Glsi-ChrGlsi03 60542933 60550380 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi03g0862 508 836 Receptor kinase-like Gene Family AT4G11530 58.160 8.04e-127 394
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Glsi03g0862 PK_Tyr_Ser-Thr 5.6e-49 CL0016