Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi03g0861 ATGTATTTCCACTCTTCTACTTGTGAGGCTATATCAACTTCTCTAAAAGTATGGCAGACTTTGATATCCCAATGCGTCTTATACAAAGACTTGGTGCGATTTAGCATTGAGTTACCAACACGCGTGGAATTTGTGGATCCCCGTGGCCTTCCTCAGCTTTTTCTTCGTAAAGGGAAAAAGAAGGTCTTCAGAAGTGGACCATGGTATGCACAACAATTTAAAGGTGGCCCAGTTCTAGAGGGAAACCCAGTTTTCAAACCCGTTTTTGTTTTTGATTCTGATGAAGTGTATTACTCATATGAGATTAAGGACAATGTCACTTCAAGATTTGTACTTAGTCAATCTGGTTTGATTCAGCACTTTTCATGGAATGATCCTCGTTCCAGCTGGATCTCTGAATTCACAGTTCAAGGAGACCGATGTGATGAAGTTTCAGCTTCAGAACTAGGTTCAAATACTGATGAAAAAAGAAGGAAGATACCTGTAATACTTCCTGTGGCTGTATCAGTAACTTCAGCTATTATTGTCTTAGTATCGTGGCTCATAATTAAAAAATGGAGAAGAAATGGAGCTAGAAAGTCAGATATTCAATTAATAGTTGGAAGATCAAGAAGTGAACTCCCATCATTTGAGATTTCCACTGTTGAAGCTGCCACAATGAATTTCTCTATCTACAATAAGATTGGTGAAGGTGGATTTGGCCCTGTATACAAAGGCCAACTTCCATCAGGACAAGAAATAGCAGTGAAAAGGCTCTCACAGAGTTCTAGACAAGGCCTGCAAGAGTTCAAGAATGAGTACATGCCAAACCGAAGCTTAGACTCCTTATTATTTGATGAAACAAAGCATTCTGTGCTCACTTGGCTAAAGAGATTGGACATTATTATTGGAATTGCTAGAGGACTTCTTTATCTACATAGAGATTCAAGGCTAAGAATAATTCACAGAGACCTAAAAGCCAGCAATGTTCTTTTAGACAGTGAAATGAACCCTAAAATTTCTGACTTTGGAATGGCAAGAATGTTTGGTGGAGATCAAATTGAAGCCACTACAAACAGAATAGTTGGATCCTATGGATATATGTCCCCAGAGTATGCAATAGATGGACATTTCTCATTCAAATCAGATGTCTTTAGCTTTGGAGTTTTATTGTTGGAGCTGTTGAGTGGCAGGAAAAACAAAGGATTTTTCCATTCAGATCACAAACTGAATCTCCTTGGCCATGCATGGAAGCTTTGGATTGAAGGAAAGGCCTTGAGTATTATGGATCCATTGCTTGAGAATCAGTTTCCTCCCTCCGAAGCTCTAAGGTGTATCCAAGTGGGGCTTTTATGCGTTCAACAGAACCCAGCAGAGCGGCCAACAATGTCTTTGGCGCTTTTGATGTTGGACAGTGAGAATGTGTTGCTGCCCCAACCCGGGAGACCAGGAGTTTATTCAGAGAGATGTTTCTCAGAGACAGATTCATCATCACTTGGAAGAATGAATTCTGGCTCCAATGACACAACCGTTACTTTACTAGAGGGTCGTTAG 1533 0.4025 MYFHSSTCEAISTSLKVWQTLISQCVLYKDLVRFSIELPTRVEFVDPRGLPQLFLRKGKKKVFRSGPWYAQQFKGGPVLEGNPVFKPVFVFDSDEVYYSYEIKDNVTSRFVLSQSGLIQHFSWNDPRSSWISEFTVQGDRCDEVSASELGSNTDEKRRKIPVILPVAVSVTSAIIVLVSWLIIKKWRRNGARKSDIQLIVGRSRSELPSFEISTVEAATMNFSIYNKIGEGGFGPVYKGQLPSGQEIAVKRLSQSSRQGLQEFKNEYMPNRSLDSLLFDETKHSVLTWLKRLDIIIGIARGLLYLHRDSRLRIIHRDLKASNVLLDSEMNPKISDFGMARMFGGDQIEATTNRIVGSYGYMSPEYAIDGHFSFKSDVFSFGVLLLELLSGRKNKGFFHSDHKLNLLGHAWKLWIEGKALSIMDPLLENQFPPSEALRCIQVGLLCVQQNPAERPTMSLALLMLDSENVLLPQPGRPGVYSERCFSETDSSSLGRMNSGSNDTTVTLLEGR 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi03g0861 510 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 268 471 - -
Glsi03g0861 510 ProSitePatterns Serine/Threonine protein kinases active-site signature. 313 325 IPR008271 GO:0004672|GO:0006468
Glsi03g0861 510 Gene3D Phosphorylase Kinase; domain 1 184 271 - -
Glsi03g0861 510 MobiDBLite consensus disorder prediction 489 510 - -
Glsi03g0861 510 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 126 508 - -
Glsi03g0861 510 Gene3D Transferase(Phosphotransferase) domain 1 272 469 - -
Glsi03g0861 510 SUPERFAMILY Protein kinase-like (PK-like) 206 476 IPR011009 -
Glsi03g0861 510 Pfam S-locus glycoprotein domain 63 143 IPR000858 GO:0048544
Glsi03g0861 510 Pfam Protein tyrosine and serine/threonine kinase 266 457 IPR001245 GO:0004672|GO:0006468
Glsi03g0861 510 SMART serkin_6 222 463 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi03g0861 510 ProSiteProfiles Protein kinase domain profile. 222 470 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi03g0861 510 Pfam Domain of unknown function (DUF3403) 465 510 IPR021820 GO:0004674
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi03g0861 Glsi-ChrGlsi03 60457255 60463292 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi03g0861 162 477 Receptor kinase-like Gene Family AT4G05200 48.571 6.98e-110 340
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Glsi03g0861 PK_Tyr_Ser-Thr 5.5e-27 CL0016