Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi03g0858 ATGGATACGAAGAAGCCTAATGCTCCATCTCCTTTGAGGAATTCCTCTTTTGCATTACAACATGGAAGGCTAGAATACCATGGAATCCCAGAAGTTTTCTTATGGAACAAACAGGTCAGGGAATTTCGAACCGGACCTTGGAATGGTCTGAGATTTGGTGGACTAGCAGTGTTGACATCAGAAGCTGTTGTTCAAGATACCATGATTGCAGATGCACACGAGGTGAAATTCAACGCTATGCTTGGACAGAAGGCAGCCAAAGTTGGAACAAATTATGGTGACACAGGATCTGCAGGTGGCTCTGGCAAGAAAAAAAATGCAGGCATGATTGTAGGCATTACAGTTGGTGCAGTTATCATACTTTTGGTTGTGATTGTCTTTCTATTATGGAAGAAGAGGAAATACCCAAGTAGACCGAAAAGAAAACCAGAACAGCTAGATAGAGAAAAAAGTGCCTTACTAGACTGGCAATTGCGCTTGGACATTATATGTGGGATAGCTAGAGGGCTTCTTTATCTTCACCAAGACTCCAGACTTAGAATTATCCACAGAGATCTCAAGGCAAGCAATATTCTACTTGACGGAGAAATGAACCCAAAGATATCAGATTTTGAGCCTAGAAACCCTGGATTTTCCCTTGCAAGGTCGACTCCTAATGATACTGATTCTTCTTCAATTAGACAAGACGAATCGTACTCAGTAAATCAAGTTACAGTAACAGTAGTAGATGCCAGGTAG 738 0.416 MDTKKPNAPSPLRNSSFALQHGRLEYHGIPEVFLWNKQVREFRTGPWNGLRFGGLAVLTSEAVVQDTMIADAHEVKFNAMLGQKAAKVGTNYGDTGSAGGSGKKKNAGMIVGITVGAVIILLVVIVFLLWKKRKYPSRPKRKPEQLDREKSALLDWQLRLDIICGIARGLLYLHQDSRLRIIHRDLKASNILLDGEMNPKISDFEPRNPGFSLARSTPNDTDSSSIRQDESYSVNQVTVTVVDAR 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi03g0858 245 SUPERFAMILY Protein kinase-like (PK-like) 151 204 IPR011009 -
Glsi03g0858 245 FunFam Os07g0541700 protein 144 221 - -
Glsi03g0858 245 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 147 221 - -
Glsi03g0858 245 ProSitePatterns Serine/Threonine protein kinases active-site signature. 181 193 IPR008271 GO:0004672|GO:0006468
Glsi03g0858 245 Pfam Domain of unknown function (DUF3403) 205 245 IPR021820 GO:0004674
Glsi03g0858 245 MobiDBLite consensus disorder prediction 208 231 - -
Glsi03g0858 245 ProSiteProfiles Protein kinase domain profile. 1 245 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi03g0858 245 MobiDBLite consensus disorder prediction 212 231 - -
Glsi03g0858 245 Pfam Protein kinase domain 149 204 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi03g0858 245 Gene3D Transferase(Phosphotransferase) domain 1 140 236 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi03g0858 Glsi-ChrGlsi03 60355929 60360304 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi03g0858 146 204 Receptor kinase-like Gene Family AT4G21410 76.271 2.21e-23 96.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Glsi03g0858 Pkinase 2.9e-10 CL0016