Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi03g0855 ATGGGAGGTTTCTCTAACCTCGTCCATGTCTTCCTCTTTTGGTTCTTCCCTTCTCTCACTTTTTTCTCCACCGTTTCAATCTCTGCAGATATCTTAACTGCAACCCAATCTCTCGCAACTAACCAAACAATTATATCACCAAAGGAGGTTTTCGAGCTGGTTTTTTTCACTTCTGGCGATTCCAGATGGTATTTGGGAATACGGTATAACAACATTTCTCTGAAAACAGTGGTTTGGGTTGCAAACAGAGATGACCCACTTGAGAATTCAACTGGGTTTCTCAAGATCGGAGACAGGGGAAACATGGTGATTGTCGATCAATCAGGGAACCCCATATGGTCCTCGAATCAAACCACAGCTAAAAACCCAGTTCTTCAGCTTTTGGATAATGGGAATCTGATTATCAGAGAAGCAGACGAGAACGACCCCTCGAAGTCTCTGTGGCAAAGCTTCGATTACCCCACGGATACTCTGTTACCAGACATGAAAATGGGTTGGAACTTCGACACAGGTATGGAGAGGCACTTAACGTCGTGGAGTAGCAACGAAGACCCATCAAGCGGAGCGTTCTCTTTCAAGCTTGATTACCATGGCCTCCCAGAAATTTTCCTGTGGAACCAAGATAACAGAACGTATAGAAGTGGACCTTGGGATGGAAACGGATTCAGCGGGGTACCAGAGATGCAACCTGGTACATATTCGATCAACTTCACGTTTTTTGCAGATGAACATGAGGTTTACTACACATTCTCCATTGGGAAACAATCGGTTCTTTCCAGACTCTCTGTGACCTCAGGTGGTGAGCTTCAACGCCTTACATGGATTCCAAGCAGCCAGGTTTGGACCAAGTTCTGGTATGCACCAAAAGATCAATGCGACAGCTACAGAACGTGTGGTCCAAATGGTATCTGTGATACTAACGCTTCACCAGTTTGCACGTGCGCAAGAGGTTTCAGGCCTAAGAACCAGCAGGCGTGGAATCTGAGAGATGGGTCTGATGGGTGTGTGAGGAACACAGAATTGGACTGTGGCAACGACAAGTTCTTGAAGCTGCAGAACGTGAAGTTGCCAGACACAACCTCAGTGTTTGTAAACAGGAGCATGAACCTTATGGAATGTGAAGATTTATGTCATACGGAATGTAATTGCACTGCTTATGCTAATATAGAGATCACCAATGGAGGAAGTGGCTGTGTCATGTGGAGTGGTGGGCTCATAGACATGAGGGTGTACACTGATGGTGGGCAAGATCTCTATGTCCGATTAGCAGCTTCTGATGTAGGACCTATAAGTGGATCTCACAAGACAAAAGATACGGCTAAGATTGTAGGCATTACAATTACTGTAGCTATTATACTACTGGGATTGGGTATCTATTTCTTATGGAAGAAGGGGAAACTGCAAAGAATATTGAAAGGGAAGGCGGACTTACCAGGTTCTGTTGAGAGAAGTCAAGATTATCTAATCAATGAGGCAGTGTTTACAAGTAATAGAGGAAATTCTGGTGAAAGTCGCATGGATGAACTAGAGTTGCCATTGTTTGATTTTAATACCATAACAATGGCTACAAACAACTTCTCCCAAGCAAATAAACTGGGAGAAGGAGGCTTTGGTAGTGTTTACCAAGGTAGGTTGATGGAAGGCCAAGAAATTGCTGTGAAAAGGCTATCAAGAACCTCTGGGCAAGGAACTGAAGAATTTAAGAATGAGGTCAAGTTAATTGTCAAGTTGCAACATCGAAATCTTGTTCGACTACTTGGTTGCTGCATTGAGAAGGATGAGAAGATGCTGGTTTATGAATACATGGAAAATAGAAGCCTTGATTCTATTCTGTTTGATAAAGCAAAAAAATCCTTATTGGATTGGCAAAGGCGCTTTAACATTATATGTGGAATAGCTAGAGGGCTTCTTTATTTGCACCAAGATTCCAGATTTAGAATTATCCATAGGGACCTCAAGGCAAGCAATATTCTACTGGACAAAGAAATGAACCCAAAGATATCAGACTTTGGGATGGCTAGAATTTTTGGCACAGATCAGACAGAAGCAAATACAATAAGAGTTGTTGGAACATATGGCTATATGTCCCCTGAATATGCTATGGATGGACTTTTCTCAGTGAAGTCTGATGTTTTTAGTTTTGGTGTTCTAGTGTTGGAGATCATAAGTGGCAAGAAGAATAGAGGATTTTATTACTCAAATACTGATTTGAACCTTCTAGGACACGCATGGAGACTGTGGAAAGAAGGAAATGCAGTTGAACTGATTGATTCATCAATTGGAAACTCATATTCACCATTTGAATTTCTTAGATGCATACAGGTTGGGCTCTTGTGTGTCCAAGAGCGCGCAGAAGATAGACCAACAATGTCTTCAGTGGTCCTGATGTTGAGTAGTGAAACTGCATCAATGCCACAGCCTAAAAACCCTGGGTTTTGCTTAGGAAGAAACCCTCCAGAAACAGATTCTTCTTCTAGTAAGATAGATGAATCATACACTGTGAACCAAGTCACAGTCACAATGCTAGATGCCAGGATGGTTAATAATTTTAGCAATTCAGGATTAAGCCTTGCCTTCACAAAGGAGAAGAAAATTTCAGGAAGGGAGAGAGCTAACTCTTAA 2622 0.4222 MGGFSNLVHVFLFWFFPSLTFFSTVSISADILTATQSLATNQTIISPKEVFELVFFTSGDSRWYLGIRYNNISLKTVVWVANRDDPLENSTGFLKIGDRGNMVIVDQSGNPIWSSNQTTAKNPVLQLLDNGNLIIREADENDPSKSLWQSFDYPTDTLLPDMKMGWNFDTGMERHLTSWSSNEDPSSGAFSFKLDYHGLPEIFLWNQDNRTYRSGPWDGNGFSGVPEMQPGTYSINFTFFADEHEVYYTFSIGKQSVLSRLSVTSGGELQRLTWIPSSQVWTKFWYAPKDQCDSYRTCGPNGICDTNASPVCTCARGFRPKNQQAWNLRDGSDGCVRNTELDCGNDKFLKLQNVKLPDTTSVFVNRSMNLMECEDLCHTECNCTAYANIEITNGGSGCVMWSGGLIDMRVYTDGGQDLYVRLAASDVGPISGSHKTKDTAKIVGITITVAIILLGLGIYFLWKKGKLQRILKGKADLPGSVERSQDYLINEAVFTSNRGNSGESRMDELELPLFDFNTITMATNNFSQANKLGEGGFGSVYQGRLMEGQEIAVKRLSRTSGQGTEEFKNEVKLIVKLQHRNLVRLLGCCIEKDEKMLVYEYMENRSLDSILFDKAKKSLLDWQRRFNIICGIARGLLYLHQDSRFRIIHRDLKASNILLDKEMNPKISDFGMARIFGTDQTEANTIRVVGTYGYMSPEYAMDGLFSVKSDVFSFGVLVLEIISGKKNRGFYYSNTDLNLLGHAWRLWKEGNAVELIDSSIGNSYSPFEFLRCIQVGLLCVQERAEDRPTMSSVVLMLSSETASMPQPKNPGFCLGRNPPETDSSSSKIDESYTVNQVTVTMLDARMVNNFSNSGLSLAFTKEKKISGRERANS 873
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi03g0855 873 PIRSF SRK 4 845 IPR024171 GO:0004674
Glsi03g0855 873 Gene3D Phosphorylase Kinase; domain 1 501 601 - -
Glsi03g0855 873 Pfam S-locus glycoprotein domain 212 322 IPR000858 GO:0048544
Glsi03g0855 873 Gene3D Transferase(Phosphotransferase) domain 1 602 809 - -
Glsi03g0855 873 MobiDBLite consensus disorder prediction 805 827 - -
Glsi03g0855 873 Pfam Domain of unknown function (DUF3403) 799 845 IPR021820 GO:0004674
Glsi03g0855 873 SMART blect_4 35 154 IPR001480 -
Glsi03g0855 873 Pfam PAN-like domain 343 408 IPR003609 -
Glsi03g0855 873 Gene3D - 23 151 IPR036426 -
Glsi03g0855 873 ProSiteProfiles Bulb-type lectin domain profile. 29 148 IPR001480 -
Glsi03g0855 873 FunFam Receptor-like serine/threonine-protein kinase SD1-8 24 151 - -
Glsi03g0855 873 ProSiteProfiles EGF-like domain profile. 288 324 IPR000742 -
Glsi03g0855 873 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 602 805 - -
Glsi03g0855 873 Pfam D-mannose binding lectin 76 179 IPR001480 -
Glsi03g0855 873 Pfam Protein tyrosine and serine/threonine kinase 529 794 IPR001245 GO:0004672|GO:0006468
Glsi03g0855 873 CDD STKc_IRAK 532 797 - -
Glsi03g0855 873 SMART ntp_6 343 422 IPR003609 -
Glsi03g0855 873 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 13 788 - -
Glsi03g0855 873 CDD B_lectin 35 154 IPR001480 -
Glsi03g0855 873 CDD PAN_AP_plant 339 423 - -
Glsi03g0855 873 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 491 601 - -
Glsi03g0855 873 SUPERFAMILY Protein kinase-like (PK-like) 502 797 IPR011009 -
Glsi03g0855 873 Pfam Receptor serine/threonine kinase 482 516 IPR022126 GO:0004674
Glsi03g0855 873 ProSiteProfiles PAN/Apple domain profile. 343 423 IPR003609 -
Glsi03g0855 873 ProSitePatterns Serine/Threonine protein kinases active-site signature. 647 659 IPR008271 GO:0004672|GO:0006468
Glsi03g0855 873 SMART serkin_6 526 797 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi03g0855 873 ProSiteProfiles Protein kinase domain profile. 526 812 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi03g0855 873 SUPERFAMILY alpha-D-mannose-specific plant lectins 77 185 IPR036426 -
Glsi03g0855 873 ProSitePatterns Protein kinases ATP-binding region signature. 532 554 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi03g0855 Glsi-ChrGlsi03 60264690 60271759 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi03g0855 514 845 Receptor kinase-like Gene Family AT4G11530 60.472 9.10e-137 421
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Glsi03g0855 PK_Tyr_Ser-Thr 3.7e-49 CL0016