Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi03g0836 ATGGCACTAGCATGGGATCATGATGAAAAGTATCATGAAAATGGCCTCCATACAGTTGAAGAAAGGTACATGGAGCCTCGAAGAAGATCACAAGTTAATAGCTTGAATGAAGAGATATGGCATTTGGAACTGGAGTCAGACGCCAAAAGCTGCTGATGGTCAGCAATTGCAGCAAAACTTCCAGGAAGAACAGACAACGACATTAAGAACCATTGGCATACCCGCTTGAAAAAGCGCTTGACCTTGTTAGATACAGCAATAGTGATCTCCCAGCATGCAACAGATCAGACATCTGAGATTGAAGCAAACCTGAAGCATATTTCATCTGAAATAAAACTCCCACTTCTCACCAATACACCGCAAGAGTCTAACTTGAATGGCTCGAGGGGTGCCCCAGAAACAGAAGAACAGTCAAATGCTGATTTATGTTCATCAAGCACTGGTTTTGGTTCTTCAGCGGTAGAGCAGAAGATAGAGGTAAATGAAGGTTCTTCCGAGACAACCGAAGAACAGTACAATTTATGGGAGCAGCCAAATTCTTTCGAGATTTTGAATTCTGCAGAAAGCGTAGGAGAATTATTAGGAGAAACTGACGTGATGGTGCCAGATTATGATCTGGAATGGCTACAGGAGCTTATATACTCATGCATTTCTGGAGATGATATTAGAGATGAATTTTTGTCCAATTTTTCAGTTCAAGCTGCAATGAACAGAATGTAA 720 0.4139 MALAWDHDEKYHENGLHTVEERYMEPRRRSQVNSLNEEIWHLELESDAKSCXWSAIAAKLPGRTDNDIKNHWHTRLKKRLTLLDTAIVISQHATDQTSEIEANLKHISSEIKLPLLTNTPQESNLNGSRGAPETEEQSNADLCSSSTGFGSSAVEQKIEVNEGSSETTEEQYNLWEQPNSFEILNSAESVGELLGETDVMVPDYDLEWLQELIYSCISGDDIRDEFLSNFSVQAAMNRM 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi03g0836 239 SUPERFAMILY Homeodomain-like 37 82 IPR009057 -
Glsi03g0836 239 Gene3D - 33 107 - -
Glsi03g0836 239 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 53 80 IPR017930 -
Glsi03g0836 239 MobiDBLite consensus disorder prediction 115 149 - -
Glsi03g0836 239 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 51 165 - -
Glsi03g0836 239 Pfam Myb-like DNA-binding domain 53 74 IPR001005 -
Glsi03g0836 239 ProSiteProfiles Myb-like domain profile. 53 76 IPR001005 -
Glsi03g0836 239 CDD SANT 53 76 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi03g0836 Glsi-ChrGlsi03 50277061 50280674 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi03g0836 53 80 MYB Transcription Factor Family AT3G23250 89.286 7.81e-11 58.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Glsi03g0836 Myb_DNA-binding 3.8e-06 CL0123