Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi03g0808 ATGATCAAACTCAAGCACCCACAGGCTCTTTTCCCATATTTGCTTCTATTTTTCATGTTTTTCGATTCATTTTTGGCCATTGATTTTGTCTTCAATAACTTCAAATCCTCCGATGTGTTGCTCTACGGCAATGCCACCATTGATTCTGGAATTCTAGCTCTCACCCATGAACAAACTTTCTCAATTGGCCGTGTTCTACACCGTGAAAAGATTCCCACCAAGAAGCCAAATTCTTCTTATTTATACCCGTTCTCTACATCTTTCATCTTTGCTATGGCACCTTATGAGGATACTCTTCCGGGGCACGGCATAGTTTTCATCTTCACATCTGTTCAAGGCATCCAAGGTACAAGCTCTGCTCAACATCTCGGTCTTTTTAACTTCACAAACAATGGAAATTCCAGCAACCATGTGTTTGGTGTTGAGTTCGATGTGTTTATGAACCAAGAGTTTGAAGACATAAACGCCAATCATGTTGGGATTGATATAAACTCACTCAAGTCTATTGCCTCACATGATGCTGGGTATTGGCCAGATGTTAGGAAAAGCGATGACGACAAATCGTTTGAAGAATTGACGCTTAACAACGGCGAAAATTACCAAGTTTGGATTGACTATGAAGATTCTTTGATTAATGTTACTATGGCACCGGTGGGCACAAATAGGCCTCGGAAGCCATTGTTGAATGTGCCTCTGAACCTATCTGGGGTTTTTGGAGATGAAATATATGTTGGTTTTACAAGTTCCACAGGACAATTAGTTGAAAGTCACAAGGTTTTGGCTTGGAGCTTTAGTAATTCAAATTTTTCGTTAAGCGGAGAACTCATTAGTACTGGGTTGCCCTCTTTTGTTCTTCCAAAAGATTCAATTTTTCAATCCAAAGGGTTTATTGCAGGATTGACAGTAGGGGTTTTCTTTACCATCCATGTCTTCATTCTGTTAGTATTGTTTTTTATTCAGAGGAAGCGAAGTATAGCAAGGGAGAGAGAAGCAATGGAGGACTGGGAATTAGAGTATTGGCCACACAGAATGACCTATGAAGAAATAGACGCAGCGACAAAGGGGTTCTGTGAGGAAAATGTGATTGGAGTTGGTGGGAATGGCAAGGTCCATAAGGGTGTTTTAGGAGGGGTAGATATTGCTGTGAAGCGTATTTCGCATGAAAATGATGGAATGAGAGAATTTCTTGCGGAAATTTCAAGTCTCGGAAGATTGAAGCATAAGAATTTGGTGGGGTTGAGAGGCTGGTGCAAGACAGATATGGGCAATTTCTTATTGATCTATGACTACATGGAAAATGGGAGTTTAGACAAAAGGGTTTTTGAATGTGATGAGAGCATAACGCTAAACTATGAAGAAAGAATAAGAACTCTGAAACATGTGGCTTCTGGGATCTTGTACTTGCACGAAGGGTGGGAAGCCAAAGTGCTGCATAGGGACATCAAAGCCAGCAATGTATTACTTGACAAGAACATGAATGCAAGGCTGGGAGATTTTGGGCTGGCTCGGATGCACAGCCATGGTCAAGTTGCTAGTACCACAAAAGTGGTTAGAACAGTGGGGTACATGGCTCCTGAGGTGATTAGGACGGGAAGAGCATCAACTCAGACAGATGTTTATATGTTTGGCATCTTAATTTTAGAGGTCATTTGTGGTAGGAGACCTCTAGAGGAAGGTAAGCCATCTTTGGTGGAGTGGGTGTGGGAACTGATGGTACTAGGGCAACTGGTAAATGCACTTGATGAGAGTTTGAGGGCTAAAGGAGGATTCAATGAGCAAGAAGCAGAGAGGGTCCTTAACTTGGGTTTGTTGTGTGCCTATCCTGAACCAAAATCCAGGCCAACAATGACACAAGCAGTGAAAATTTTAGAGGGAAAGAATGAGGGTGAGGAATCAGAAAGCGAGGAGATGGATACACATTTGCTCCAACAGATGAAATCAAGGGACATATTGTATGAGTATTCTCATTATTTTAACTATTCATCTCACCCAACATTTGAAGATATTCGACAGACTCACTCTTCCTCAATGTCTCTCACTAGCACCAACTCTATAGTTCAGGGTAGGTAA 2070 0.4159 MIKLKHPQALFPYLLLFFMFFDSFLAIDFVFNNFKSSDVLLYGNATIDSGILALTHEQTFSIGRVLHREKIPTKKPNSSYLYPFSTSFIFAMAPYEDTLPGHGIVFIFTSVQGIQGTSSAQHLGLFNFTNNGNSSNHVFGVEFDVFMNQEFEDINANHVGIDINSLKSIASHDAGYWPDVRKSDDDKSFEELTLNNGENYQVWIDYEDSLINVTMAPVGTNRPRKPLLNVPLNLSGVFGDEIYVGFTSSTGQLVESHKVLAWSFSNSNFSLSGELISTGLPSFVLPKDSIFQSKGFIAGLTVGVFFTIHVFILLVLFFIQRKRSIAREREAMEDWELEYWPHRMTYEEIDAATKGFCEENVIGVGGNGKVHKGVLGGVDIAVKRISHENDGMREFLAEISSLGRLKHKNLVGLRGWCKTDMGNFLLIYDYMENGSLDKRVFECDESITLNYEERIRTLKHVASGILYLHEGWEAKVLHRDIKASNVLLDKNMNARLGDFGLARMHSHGQVASTTKVVRTVGYMAPEVIRTGRASTQTDVYMFGILILEVICGRRPLEEGKPSLVEWVWELMVLGQLVNALDESLRAKGGFNEQEAERVLNLGLLCAYPEPKSRPTMTQAVKILEGKNEGEESESEEMDTHLLQQMKSRDILYEYSHYFNYSSHPTFEDIRQTHSSSMSLTSTNSIVQGR 689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi03g0808 689 SMART serkin_6 356 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi03g0808 689 FunFam Putative L-type lectin-domain containing receptor kinase VII.2 318 430 - -
Glsi03g0808 689 Gene3D - 26 272 - -
Glsi03g0808 689 ProSitePatterns Serine/Threonine protein kinases active-site signature. 476 488 IPR008271 GO:0004672|GO:0006468
Glsi03g0808 689 SUPERFAMILY Concanavalin A-like lectins/glucanases 26 270 IPR013320 -
Glsi03g0808 689 ProSiteProfiles Protein kinase domain profile. 356 641 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi03g0808 689 PANTHER - 45 627 - -
Glsi03g0808 689 SUPERFAMILY Protein kinase-like (PK-like) 333 624 IPR011009 -
Glsi03g0808 689 Pfam Protein kinase domain 358 621 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi03g0808 689 FunFam L-type lectin-domain containing receptor kinase S.4 25 272 - -
Glsi03g0808 689 FunFam L-type lectin-domain containing receptor kinase S.4 431 636 - -
Glsi03g0808 689 CDD lectin_legume_LecRK_Arcelin_ConA 27 262 IPR001220 GO:0030246
Glsi03g0808 689 Pfam Legume lectin domain 27 268 IPR001220 GO:0030246
Glsi03g0808 689 Gene3D Phosphorylase Kinase; domain 1 319 430 - -
Glsi03g0808 689 CDD STKc_IRAK 362 625 - -
Glsi03g0808 689 Gene3D Transferase(Phosphotransferase) domain 1 431 650 - -
Glsi03g0808 689 ProSitePatterns Protein kinases ATP-binding region signature. 362 383 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi03g0808 Glsi-ChrGlsi03 47053313 47055382 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi03g0808 26 571 Receptor kinase-like Gene Family AT4G04960 65.036 0.0 709
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Glsi03g0808 Pkinase 9.6e-44 CL0016