Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi03g0767 ATGAAAGCTGGAGAGCGCGCCTTACTGCATGTGGGCTGGGAATTAGGATATGGAAAGGAAGGAAGCTTTTCTTTTCCAAATGTTCCATCCATGGTAGATTTAATTTATGAAGTTGAGTTTATAGGCTTTGATGAAACAAAAGAAGGAAAAGCACATAGTGACATGACTGTGGAGGAAAGAATTGGTGCAGCAGATAGGAGAAAGATGGATGGAAATGCTTTGTTTAAGGAAGAAAAACTGGAGGATGCTATGCAACAGTATGAAATGTTGTTTGGGAAGTATAGAGATATGGCTTTGGCTGTAAAGAATCCATGCCACCTTAACATGGCAGCATGTTTTATAAAGCTGAATCGTTATGAAGAAGCCATAGGACAATGTAGCCTTGTATTGAGTGAGGATGAAAACAATGTTAAGGTATTATTTAGACGAGGTAAGGCTAGGGTAGCACTTTGGCAAACAAATGTTGCCAGGGAGGATTTTCTAAAAGCAAGGAACTGTGCCCCTAAAGATAAAGCAATTGCAAAAGAATTGCTAAAGTAA 540 0.3907 MKAGERALLHVGWELGYGKEGSFSFPNVPSMVDLIYEVEFIGFDETKEGKAHSDMTVEERIGAADRRKMDGNALFKEEKLEDAMQQYEMLFGKYRDMALAVKNPCHLNMAACFIKLNRYEEAIGQCSLVLSEDENNVKVLFRRGKARVALWQTNVAREDFLKARNCAPKDKAIAKELLK 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi03g0767 179 Gene3D - 1 45 IPR046357 GO:0003755
Glsi03g0767 179 PANTHER ARYL HYDROCARBON RECEPTOR INTERACTING PROTEIN RELATED 1 177 IPR039663 -
Glsi03g0767 179 SUPERFAMILY TPR-like 55 177 IPR011990 GO:0005515
Glsi03g0767 179 Gene3D Tetratricopeptide repeat domain 46 165 IPR011990 GO:0005515
Glsi03g0767 179 SMART tpr_5 137 170 IPR019734 GO:0005515
Glsi03g0767 179 SMART tpr_5 64 97 IPR019734 GO:0005515
Glsi03g0767 179 SMART tpr_5 103 136 IPR019734 GO:0005515
Glsi03g0767 179 SUPERFAMILY FKBP-like 1 52 - -
Glsi03g0767 179 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 1 44 IPR001179 GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi03g0767 Glsi-ChrGlsi03 35674532 35676212 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi03g0767 1 173 Calmodulin-binding Proteins AT3G25230 34.783 5.72e-22 90.1