Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi03g0764 ATGGCTTCCTCCAACAGACACTGGCCAAGCATGTTCAAGTCCAAGCCTTGCAACCCCCACCACCGATGGCAGAATGACATCAACTCCTCTCTCATGTCCACTGGCTGCCACAGAAGCCCTTACACTTCTCCATCAGGGTGTGAGGAGAGAAGTCCAGAGCCAAAGCCAAGATGGAACCCAAAACCGGAGCAAATTCGCATACTTGAAGCCATCTTCAATTCTGGGATGGTGAACCCTCCAAGAGACGAGATAAGGAAGATCAGATCACAACTGCAAGAGTATGGCCAAGTCGGTGATGCCAATGTCTTCTACTGGTTCCAGAACCGCAAATCCAGAAGCAAGCTCAAGCTTCGCAACCTCCAAAACTCGAAGAACCAAACCCCATCACCAGCCCACCAAAACCCTTGTCTCGCTCAACCCATAGCACCCTCATCCTCATCCTCTTCCTCTGAGAAATCTCGTCCAAAGGAAATGATACCCGCGAAGGCATTCTCAATTGTCTTCTCTACTGATATGTTACCCAATTCTCCCACCGTCTCTGAGAACCAGGCTTATTTTCAGACCCAAAATGAGACCACTCTGCCAGCAGCTGCTGAGCCTTTCTTCTTCCACCCAGTACACCATAATGGTGGAGGAGGAGGAGTGGCTACTACTATAACACAAGGGTTTTTTTCCTCGGAGCTCTCAAATGTGGCTCAATCTCAAGCTCAAGCTCCTCATGATCAACAAAATGTTGGCCCGTGCACTAGTCTCTTACTTGCTGAAATGATGACCCATGGAGTCTTAAAGAAGAAGCAAGAAGAAAAGGCCATGAAAATCATGCACCAACACCCACATCTTAGCTTCTGTGTCAATTCCACTCCCACCATTCAAACTACTGTTGTCCCTTCCATCACTACCACCAGTGTTACTGTTCCATTCCCCATCACTCAAGTTCAAGGTGCAGGTGAGCCAGATGGGATGATGAAATCCACGGTGTTCATTAACAACGTCGCATTCGAGGTAGCTGTGGGACCCTTCAACGTGTGGGAAGCCTTCGGTGATGACGCTGTGCTCATCCACGCATCAGGTCACCCTGTTCTCACAAACGAGTGGGGCGTCACCCTTGAGTCTCTCCAGCACGGCGCATTTTATTATGTGGTGTGCACGTTAAGAGCCTGA 1161 0.4935 MASSNRHWPSMFKSKPCNPHHRWQNDINSSLMSTGCHRSPYTSPSGCEERSPEPKPRWNPKPEQIRILEAIFNSGMVNPPRDEIRKIRSQLQEYGQVGDANVFYWFQNRKSRSKLKLRNLQNSKNQTPSPAHQNPCLAQPIAPSSSSSSSEKSRPKEMIPAKAFSIVFSTDMLPNSPTVSENQAYFQTQNETTLPAAAEPFFFHPVHHNGGGGGVATTITQGFFSSELSNVAQSQAQAPHDQQNVGPCTSLLLAEMMTHGVLKKKQEEKAMKIMHQHPHLSFCVNSTPTIQTTVVPSITTTSVTVPFPITQVQGAGEPDGMMKSTVFINNVAFEVAVGPFNVWEAFGDDAVLIHASGHPVLTNEWGVTLESLQHGAFYYVVCTLRA 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi03g0764 386 ProSiteProfiles 'Homeobox' domain profile. 51 116 IPR001356 GO:0003677
Glsi03g0764 386 SMART HOX_1 53 120 IPR001356 GO:0003677
Glsi03g0764 386 MobiDBLite consensus disorder prediction 121 154 - -
Glsi03g0764 386 FunFam WUSCHEL-related homeobox 11 55 122 - -
Glsi03g0764 386 MobiDBLite consensus disorder prediction 21 46 - -
Glsi03g0764 386 Pfam Homeodomain 55 114 IPR001356 GO:0003677
Glsi03g0764 386 PANTHER WUSCHEL-RELATED HOMEOBOX 9 1 381 IPR044557 GO:0003700|GO:0050793
Glsi03g0764 386 MobiDBLite consensus disorder prediction 121 156 - -
Glsi03g0764 386 Gene3D - 55 121 - -
Glsi03g0764 386 CDD homeodomain 54 114 IPR001356 GO:0003677
Glsi03g0764 386 MobiDBLite consensus disorder prediction 1 62 - -
Glsi03g0764 386 SUPERFAMILY Homeodomain-like 50 114 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi03g0764 Glsi-ChrGlsi03 35036091 35037908 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi03g0764 1 122 Wox Gene Family AT2G33880 81.452 7.96e-62 202
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Glsi03g0764 Homeodomain 3e-14 CL0123