Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi03g0762 ATGACGCGCCTTAGACCACGTCTTTGCATTGAAATCTTGAAAGTAATCCAAGGACAATTTATGGCTATGGAGGTGGGGGCACAACACAAACGCACTGAAGCTTCCCACTCCAATAGGATTCCTGGCGGGTTGAAGAGGAACTCGTGGGCGAAAACGGTGGGGGAAAACGGTGACCGAAGAAGGCTTCTAGGTTCCTATGCCGGCCACGGCACGACTCTGCTGGTGGGATCGCTTGCTGGGGGTGCTCCTTCGAACTCGGGATCTCACGCTGAAATAAATTCAGCCCCAAACCCCACACTCTCTTCACTCACTCTGTTTTCTATAAGCAGAGCCACCATGCTTCTTCCCCTGTTCCTCCTCCTCTGCTTCCTCTCCCCTCTTCCCTCTATTCTCTCTCTGAACCAAGAGGGTCTCTACCTCTACCAGTTCAAGCTATCTTTGGATGACCCTGACTCCTCCCTCGCCTCCTGGAACGACCGTGACACAACCCCCTGCAACTGGTCTGGCATCACCTGCGACCCATCAAATAGCTCCGTCACCCACCTCGACCTCTCGAACACCAACATTGTAGGCCCATTCTCTGCTTCGATTCTATGCCGCCTCACCAATCTCTCCTCCATCACTCTCTTCAACAACTCCATCAATGATACCCTCCCTTTGGAAATCTCCTCATGTCGCAACCTTGTCTACCTTGACCTCTCCCAGAACCTCCTCACTGGTGCACTCCCCCACACCTTATCTCAGCTCCCCAATCTCCAGTACCTAGACTTAACAGGCAACAACTTCTCAGGTCCCATACCCGATTCGTTTGGCAGCTTTCAGAAGCTTGAGATTATCTCTCTTGTCTACAACCTTCTAGACGGAACCATACCCGCTTCTCTCGGTAACATTACCACCCTGAAGATGCTCAATCTGTCTTACAACCCGTTCTTCCCGGGTCGGATCCCGCCGGAGATTGGCAACCTCACGAATCTCGAAGTTCTTTGGCTTACGCAGTGTAGCTTGTTGGGCACGATTCCTGACTCGCTCGGTAAGCTCAAGAAGCTTAAGGATTTGGACCTGGCCTTCAATAACCTATACGGGTCGATCCCGAGTGCGCTCACTGAGTTGACAAGCGTGAACCAGATTGAACTGTATAATAATTCGTTGTCCGGCGGGTTGCCTCGGGGAATATTGAACCTCACCGCATTGAGGCTACTCGATGTGTCCATGAATCATTTGACCGGGAGGGTTCCCGACGAGTTGTGTCGGTTACCTCTCGAGAGCCTCAACCTTTACGAGAATCGTTTTGAGGGTGAGTTGCCGGAGAGCATAGCCGACTCGCCGAATCTCTATGAGCTCAGATTGTTTGGGAACAGACTCACCGGGAAACTGCCTGCAAACCTCGGGAAAAATTCCCCTTTGAGGTGGCTTGATGTTTCGAGCAACCAGTTCTGGGGGGGAATTCCGGTGACTTTGTGTGATCATGGGCAGTTGGAGGAGCTTCTGATGATTTACAACTTGTTCTCTGGGGAGATCCCGGCGAGTTTGGGCATGTGTCAGAGTTTGACGCGGGTCAGACTCGGTTTCAATCGGTTCTCGGGCGAAGTTCCGGCGGGCATATGGGGACTTCCACATGTGTATCTGGTTGAGCTCGTTGATAACTCGTTTTCGGGTTCAATCTCGACAACTATTGCTGGGGCGGGGAATCTGTCATTGTTGATTTTATCGAAGAACAATTTCACTGGAGCGATCCCTGATGAGATTGGATGGCTAGAAAATCTTGAGGAATTTTCTGGGAGTGATAACAAGTTTAGTGGATCGCTGCCTGATGGTATTGTGAATCTTGGGCAGCTTGGAACTCTTGATCTTCATAGCAATAAACTCTCTGGCGAGCTTCCGAAGGGAATGCGATCTTGGAAGAAACTCAATGAGTTGAATTTGGCAAACAATGAGATTAATGGGAACATTCCTAATGAAATTGGTATTTTATCCGTTCTTAATTTCCTTGATCTTTCCCATAATCAACTTTCTGGAAAAATTCCTCTGGGGTTGCAGAATTTGAAGCTCAATCAGCTAAATTTGTCGTATAATCGATTTTCTGGAGAACTTCCCCCTCTGTTGGCTAAGGATATGTACAGGACTAGTTTTCTGGGTAATCCTGGTTTGTGTGGGGATTTGAAAGGTCTATGTGATGGCAGAGGCGAAGATAAAAGTGCAGGTTATGTTTGGTTGCTTCGAACTATTTTCATTGTTGCTACTTTGGTGTTTGTCATTGGTGTGGTCTGGTTCTATTTCAAGTATAGGAACTTCAAGAACGCAAAAAGAGCTTTTGATAAATCAAAATGGACTTTGATGTCATTCCATAAATTGGGTTTCAGTGAAGATGAGATTTTGAACTGTCTTGATGACGATAATGTAATAGGAAGTGGATCATCGGGGAAAGTTTACAAGGTTGTACTTAGCAATGGGGAGACTGTTGCCGTGAAAAAACTATGGGAAGGGATCAGAAAGGATATAGAGAGAGGGGATTTTGATAAAGGTCGGGTTCAAGACAATGCTTTTGATGCAGAGGTTGAAACTCTGGGCAAAATTAGGCACAAGAACATTGTCAAGCTGTGGTGTTGCTGCACCACCAGGGACTGCAAGCTCTTGGTGTATGAGTACATGCCAAATGGTAGCCTTGGTGATTTGCTGCATAGCAGTAAAGGAGGGTCGTTGGATTGGCCAACGAGATATAAGATAGCGGTTGATGCTGCGGAAGGCCTCTCTTATCTGCATCATGACTGTGTTCCCCCAATTGTTCATAGAGATGTAAAATCCAACAATATCTTGTTGGATGGGGACTTTGGTGCAAGGGTGGCTGATTTTGGAGTAGCTAAGGTGGTTGAAACCACTGCAAAAGGAGCTAAATCCATGTCAGTCATAGCTGGGTCATGTGGGTACATTGCACCAGAGTATGCATACACGCTTAGAGTGAACGAGAAGAGCGACATATACAGTTTTGGTGTTGTCATACTTGAGTTAATAACTGGAAGACGCCCAGTGGACCCAGAATTTGGGGAAAAAGACTTGGTTAAGTGGGTCTGCACCACCTTGGATCAGAAGGGTGTGGATCATGTGCTTGACTCCACACTCGATTCTTGTTTCAAAGAAGAAATTTGCAAGGTCCTCAACATTGGCCTGATGTGTACCAGTCCTCTTCCAATCAATCGTCCGGCAATGAGAAGAGTGGTGAAGTTGTTGCAAGAGGTGGGCACAGATAACCAAATGAAGCCTTTCAAGAAAGATGGAAAGTTGTCACCTTATTACTATGATGATACCTCGGATCATGGAAGTGTAGCTTAA 3327 0.4725 MTRLRPRLCIEILKVIQGQFMAMEVGAQHKRTEASHSNRIPGGLKRNSWAKTVGENGDRRRLLGSYAGHGTTLLVGSLAGGAPSNSGSHAEINSAPNPTLSSLTLFSISRATMLLPLFLLLCFLSPLPSILSLNQEGLYLYQFKLSLDDPDSSLASWNDRDTTPCNWSGITCDPSNSSVTHLDLSNTNIVGPFSASILCRLTNLSSITLFNNSINDTLPLEISSCRNLVYLDLSQNLLTGALPHTLSQLPNLQYLDLTGNNFSGPIPDSFGSFQKLEIISLVYNLLDGTIPASLGNITTLKMLNLSYNPFFPGRIPPEIGNLTNLEVLWLTQCSLLGTIPDSLGKLKKLKDLDLAFNNLYGSIPSALTELTSVNQIELYNNSLSGGLPRGILNLTALRLLDVSMNHLTGRVPDELCRLPLESLNLYENRFEGELPESIADSPNLYELRLFGNRLTGKLPANLGKNSPLRWLDVSSNQFWGGIPVTLCDHGQLEELLMIYNLFSGEIPASLGMCQSLTRVRLGFNRFSGEVPAGIWGLPHVYLVELVDNSFSGSISTTIAGAGNLSLLILSKNNFTGAIPDEIGWLENLEEFSGSDNKFSGSLPDGIVNLGQLGTLDLHSNKLSGELPKGMRSWKKLNELNLANNEINGNIPNEIGILSVLNFLDLSHNQLSGKIPLGLQNLKLNQLNLSYNRFSGELPPLLAKDMYRTSFLGNPGLCGDLKGLCDGRGEDKSAGYVWLLRTIFIVATLVFVIGVVWFYFKYRNFKNAKRAFDKSKWTLMSFHKLGFSEDEILNCLDDDNVIGSGSSGKVYKVVLSNGETVAVKKLWEGIRKDIERGDFDKGRVQDNAFDAEVETLGKIRHKNIVKLWCCCTTRDCKLLVYEYMPNGSLGDLLHSSKGGSLDWPTRYKIAVDAAEGLSYLHHDCVPPIVHRDVKSNNILLDGDFGARVADFGVAKVVETTAKGAKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELITGRRPVDPEFGEKDLVKWVCTTLDQKGVDHVLDSTLDSCFKEEICKVLNIGLMCTSPLPINRPAMRRVVKLLQEVGTDNQMKPFKKDGKLSPYYYDDTSDHGSVA 1108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi03g0762 1108 Gene3D Phosphorylase Kinase; domain 1 778 882 - -
Glsi03g0762 1108 ProSitePatterns Protein kinases ATP-binding region signature. 801 824 IPR017441 GO:0005524
Glsi03g0762 1108 SUPERFAMILY L domain-like 491 717 - -
Glsi03g0762 1108 Gene3D Ribonuclease Inhibitor 133 291 IPR032675 -
Glsi03g0762 1108 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase 883 1092 - -
Glsi03g0762 1108 SMART serkin_6 795 1056 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi03g0762 1108 SUPERFAMILY RNI-like 181 528 - -
Glsi03g0762 1108 FunFam Leucine-rich receptor-like protein kinase family protein 315 413 - -
Glsi03g0762 1108 Gene3D Ribonuclease Inhibitor 292 419 IPR032675 -
Glsi03g0762 1108 ProSitePatterns Serine/Threonine protein kinases active-site signature. 927 939 IPR008271 GO:0004672|GO:0006468
Glsi03g0762 1108 Gene3D Transferase(Phosphotransferase) domain 1 883 1097 - -
Glsi03g0762 1108 Pfam Leucine Rich Repeat 324 346 IPR001611 GO:0005515
Glsi03g0762 1108 Pfam Protein kinase domain 798 1016 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi03g0762 1108 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 342 1077 - -
Glsi03g0762 1108 FunFam Receptor-like protein kinase HSL1 779 882 - -
Glsi03g0762 1108 ProSiteProfiles Protein kinase domain profile. 795 1088 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi03g0762 1108 SUPERFAMILY Protein kinase-like (PK-like) 790 1075 IPR011009 -
Glsi03g0762 1108 Pfam Leucine rich repeat N-terminal domain 134 173 IPR013210 -
Glsi03g0762 1108 Gene3D Ribonuclease Inhibitor 420 726 IPR032675 -
Glsi03g0762 1108 FunFam Receptor-like protein kinase HSL1 419 726 - -
Glsi03g0762 1108 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 133 297 - -
Glsi03g0762 1108 Pfam Leucine rich repeat 224 262 IPR001611 GO:0005515
Glsi03g0762 1108 SMART LRR_typ_2 657 680 IPR003591 -
Glsi03g0762 1108 SMART LRR_typ_2 201 225 IPR003591 -
Glsi03g0762 1108 SMART LRR_typ_2 394 418 IPR003591 -
Glsi03g0762 1108 SMART LRR_typ_2 609 633 IPR003591 -
Glsi03g0762 1108 SMART LRR_typ_2 346 370 IPR003591 -
Glsi03g0762 1108 SMART LRR_typ_2 226 248 IPR003591 -
Glsi03g0762 1108 SMART LRR_typ_2 249 272 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi03g0762 Glsi-ChrGlsi03 33432100 33438820 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi03g0762 128 1108 Receptor kinase-like Gene Family AT1G28440 71.457 0.0 1448
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Glsi03g0762 Pkinase 8.1e-42 CL0016