Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi03g0751 ATGGAAACAAGCAGAGCTGAGGGAAAGAGGAGCTTGAGTTACAAGGAGGAGGAGGAGGAGGGTCAAGAAGAGGAATATGATGAAGAGATGAGCGAGTTGGGTTTTGGAGAGGATGTCAGAAAGAAAAGAATGATGAAGACAGATCTCTACAGTAAGAGAGGGTCCAAACCTGGAGGCTCATCAATGCCACCTTCTTGTCAGGTGGATGGTTGTGACACTGATCTAAGTAATGCTAAGCAGTATTACCGGCGGCACAAGGTTTGCGAGTGCCATTCCAAGGCTTCTACCGTCCCCGTTGCAGGGCTGCAGCAACGGTTTTGCCAGCAATGTAGCAGGTTTCATGAGCTATCAGAATTTGATGACTCCAAAAGAAGTTGTAGAAGGCGTTTGGCAGGACATAATGAGAGGCGTCGGAAAATTGTATCTGATTATCATGGGGAAGGATTTCATCAATGA 456 0.4671 METSRAEGKRSLSYKEEEEEGQEEEYDEEMSELGFGEDVRKKRMMKTDLYSKRGSKPGGSSMPPSCQVDGCDTDLSNAKQYYRRHKVCECHSKASTVPVAGLQQRFCQQCSRFHELSEFDDSKRSCRRRLAGHNERRRKIVSDYHGEGFHQ 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi03g0751 151 SUPERFAMILY SBT domain 64 144 IPR036893 GO:0003677|GO:0005634
Glsi03g0751 151 PIRSF SBP 1 151 IPR017238 GO:0003677|GO:0003700|GO:0009908
Glsi03g0751 151 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 27 139 IPR044817 GO:0003677
Glsi03g0751 151 MobiDBLite consensus disorder prediction 1 17 - -
Glsi03g0751 151 Pfam SBP domain 66 139 IPR004333 GO:0003677
Glsi03g0751 151 ProSiteProfiles Zinc finger SBP-type profile. 63 140 IPR004333 GO:0003677
Glsi03g0751 151 MobiDBLite consensus disorder prediction 1 39 - -
Glsi03g0751 151 MobiDBLite consensus disorder prediction 18 32 - -
Glsi03g0751 151 Gene3D - 57 127 IPR036893 GO:0003677|GO:0005634
Glsi03g0751 151 FunFam Squamosa promoter-binding-like protein 14 58 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi03g0751 Glsi-ChrGlsi03 30306533 30308757 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi03g0751 57 148 SBP-box Gene Family AT3G15270 68.817 2.33e-42 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Glsi03g0751 SBP 9.8e-34 No_clan