LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Glsi03g0742	ATGAAGAAGGTTTCCAAGACCAGCTGCAAGTCAGCATCGCACAAGCTCTTCAAGGACAAGGCGAAGAACCGGGTTGATGATCTGCAACTGATGTTCCTGGATCTGCAGTTTGCCAAGAAGGAGAGCCGTACAGTGGATGCTGCAGTGCTTGAGGAGCAAGTCCATCAAATGCTTCGTGAGTGGAAGGCTGAGCTCAACGAGCCCTCTCCTGCTTCTTCTTTACAGCAAGGTGGCAGTCTTGGGTCATTCTCGACCGATATCTGTCGGTTATTGCAGCTGTGTGAGGAAGAAGATGATGCCACTAGTCCTTTAGCTGCACCTAAGCCTGAACCGAATGATCTGAGTCTGCAAGTTGGGGGTAATATGATATTCCAAGAGGGTCAACAGCAACATGATTTCCCGTTGGTTGATGAGACCAAACATTCCACCTCAGGAGTTCGCAATGTGGCATCTAACAATTTTGATGGGGCAGCTCTAGAATATCATCAGTTTGATTTGTATCAAGACTTTGATCACAGCTTTTATGCTGGTTTTAATGGTACAGCTTTTTGTGAGGAGGATGCTATTCCTCATATGTCTAACTATCTACCAAATATCTGCCTTCCTCCTTCTGCTTTCTTGGGCCCAAAATGCGCACTTTGGGACTGTCCAAGGCCTGCTCAAGGGTTGGACTTGTGTCAAGACTACTGCAGTAGCTTTCATGCCACTTTAGCATTCAATGAAGGGCCACCAGGCATGGCCCCAGTGCTACGACCTGGGGGCATTGGTTTGAAGGATAATTTACTTTTTGCTGCTCTTAGTGCAAAGGCACAAGGAAAAGATGTTGGCATCCCAGAATGTGAGGGAGCAGCAACTGCAAAGTCTCCATGGAATGCACCTGAGCTCTTTGATCTTTCTGTTCTTGAGGGTGAGACAATTAGGGAGTGGCTCTTCTTTGATAAGCCTCGAAGAGCATTTGAGAGTGGAAACAGAAAGCAAAGGTCACTGCCGGATTATAGTGGACGTGGTTGGCATGAATCTAGGAAGCAAGTGATGAATGAGTTTGGAGGGCTGAAGCGGTCCTATTATATGGATCCACAACCCTTGAATCAGTTTGAGTGGCATCTTTACGAATATGAGATTAACAAGTGTGATGCATGTGCGTTATATCGTCTGGAACTGAAGCTTGTTGATGGGAAGAAAAGCTCCAAGACAAAGGTAACAAATGATTCAGTTGCTGATCTGCAGAAGCAGATGGGAAGGCTCTCTGCTGAGTTTCCTCCTGAAAAACGGTCTGCCAAAGGCAGAGCCAAACTTAATGCCAAGGTTGGCATAGGTGGGGTCTATTCAGCTTCAAACAGAGTGACTCCACTCAATGGAACATATGAGTATGGGTTACCGGCACCATATGACTATCTTGTGGAGAATGTAAGCGACTATTATGTCACGTGA	1431	0.4633	MKKVSKTSCKSASHKLFKDKAKNRVDDLQLMFLDLQFAKKESRTVDAAVLEEQVHQMLREWKAELNEPSPASSLQQGGSLGSFSTDICRLLQLCEEEDDATSPLAAPKPEPNDLSLQVGGNMIFQEGQQQHDFPLVDETKHSTSGVRNVASNNFDGAALEYHQFDLYQDFDHSFYAGFNGTAFCEEDAIPHMSNYLPNICLPPSAFLGPKCALWDCPRPAQGLDLCQDYCSSFHATLAFNEGPPGMAPVLRPGGIGLKDNLLFAALSAKAQGKDVGIPECEGAATAKSPWNAPELFDLSVLEGETIREWLFFDKPRRAFESGNRKQRSLPDYSGRGWHESRKQVMNEFGGLKRSYYMDPQPLNQFEWHLYEYEINKCDACALYRLELKLVDGKKSSKTKVTNDSVADLQKQMGRLSAEFPPEKRSAKGRAKLNAKVGIGGVYSASNRVTPLNGTYEYGLPAPYDYLVENVSDYYVT	476

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Glsi03g0742	476	PANTHER	TRANSCRIPTION FACTOR VOZ1	1	471	IPR039277	GO:0006355\|GO:0048578

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Glsi03g0742	Glsi-ChrGlsi03	28107061	28118563	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Glsi03g0742	3	475	VOZ-9 Transcription Factor Family	AT1G28520	71.951	0.0	700

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	VOZ	Glsi03g0742		None	None	None