Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi03g0740 ATGTCGAAATTCCGACTAATGGACCAAGAAAATAAAGTGTTTCTGCTGCTGCTGCTTCTACTATTCCAAGTTCTGCTTATAGCAGCACAGAACCCCAGTGAAGACTTTACTGCTTTAGCATCTCTCACGGAATTTTGGGAGAACAAACCATCAAGTTGGGTGGGTGCAGATCCTTGTGGTGGTTGGGAAGGTATTCGTTGCAGAAATTCAAGAGTGACCTCAATAATATTTTCAAGCATGAATTTGAAGGGAAGGTTATCTGGAGACATAAAATCATTATCTGAATTACTGACTCTGGATCTCTCTTTTAATAAGGGCCTGACAGGAACAATTCCAGGAGAAATTGGGGATTTGAAGAAGCTTCAAACTCTAACACTGGTTGGTTGTAGCTTCTTTGGTCCTATTCCAGAATCAATAGGATCTCTTAAGCAGCTTTCCTTCTTAGCGCTGAATTCTAATCGGTTCATTGGAAAGATTCCACGTACCATTGGCAATCTATCTAATATTGATTGGCTAGATCTTGCTGATAACCAGCTTGAAGGATCTATCCCTGTCTCTGATGATGAAGGACCTGGACTTGACATGCTGCTCAAGGCAGAACACTTTGAAGGATCTAAGACTATGTTCACCTTGTGCAGTCATTTTGGAAACAACAAGCTCTCAGGTGAAATTCCGGCTCAGCTTTTCAGCTCAAATATGCATCTGAAACACCTGCTTTTTGACAGCAATCAACTAAATGGCAGCATTCCCGGCACCATTGGACTTGTAAAGTCACTGGAGGTGGTGCGCTTAGATAGGAATCAGATAAGTGGGGAAGTGCCTTCAAACCTCAGCAATCTCATAAATCTCAGTGAGCTGTATTTATCCAACAATAGACTGAATGGCCCTATTCCAGATCTTACCAGGTTGAATCTTCTCACCTATGTGGATTTGAGCAACAACACTTTCAATTCTACTGATATTCCTTCATGGGCCTCGAGTTTGGAGTTTTTGACTACATTGTATGTTGTTCCTATCTCCTTCCTTCTCACCCCACCATATGCATGCATGGAAAACACAGGACTCCAAGGGCAAATACCTGGCTCCTTATTTAACCAGTCCAATATAGAGACTGTGGTACTGAGGAACAACCTGTTCGATGGTACCTTAGATATTGGCAATGCCTACAGCAGCCATCTACAACTCACTGATTTGGAGAACAATAAAATAACTGACTTCAAGCAGAAAAACACCGAAAACAATATTACAGTCATACTAGTTCGCAACCCAATTTGTATTGAAACAGGAGCTACTTCAGAAAGTTACTGCAAAGATTCCCAACCCAGTATCTCATATTTAACACCACGAAATAATTGTGAACCTCTTCTTTGCAGTTCAGATCAGGTTTCCAGTCCTAACTGTAAATGTGCACATCCCTATACCGGATTGCTGTTTTCCAGAGCTCTTAGTTTCTCAAACTTAGGAAACACAAGTTACTATAGGGCTCTTGAGCAATCTCTGAGGGATACTTTTCTATCCCAAAACCTTCCCGTTGATTCAGTTTCTCTCAGCAATCCCTTCAGGAATTCTTCTTCTGATTATTTTGAATTGACCTTTAATGTCTTCCCATCTCAAACTGATCGTTTCAATAGAACTGGAGTTTCAAGTATTGCTTTTGTTCTTAGCAACCAGATTTTTAAGCCCCCAGAATTTTTCAGCCCTTACTTCTTCATTGGTGATGACTATGGATACTATGCAGGAGAACCTGCAACATCAAAAAAATCACATACAGGGGTTATAGTTGGTGCAGTAGTTGCTGTTTTGGTCTTTTTGGTACTGTCACTCCTTGCAGGGATATATGCTATTCGCCAAAAGAAAAGAGCAAAAAAAGCCAAGGACTTTAATCCTTTTGCAAACTGGGAAGAGAACAAGAACAGTGGCAATGCTCCTCAGTTAAAAGGAGCACGTTGGTTTTCTTTTGAAGAGCTAAGGAAATACAGCAACAACTTTATAGAAGCCAACACTATTGGATCTGGGGGCTATGGAAAGGTTTACCAAGGTGTTCTTCCCACTGGGGAATTGGTTGCCATCAAGCGGGCTTCACAAGAATCTATGCAGGGTGCTGTTGAGTTCAAAACTGAGATTGAGCTTCTATCAAGGGTCCATCACAAGAATCTTGTTGGTCTTGTGGGTTTCTGTTTTGAGAAAGGTGAACAAATGCTGGTATATGAGTATATTCCAAATGGCACTTTGATGGACAGTCTTTCAGGAAAATCTGGAATCATTATGGATTGGATGAGAAGGCTAAAAGTAGCCCTGGGTGCAGCCAGGGGGCTGGCCTATCTACATGAACTTGCCAACCCACCAATTATACACAGGGACATAAAATCAAGCAATATCCTACTCGATGACTACCTAAATGCCAAAGTTGCTGATTTTGGTCTCTCCAAACTTGTTGACAGTGAAAGGGGCCATATCACTACTCAAGTCAAAGGAACAATGGGGTACTTGGATCCTGAATATTACATGACTCAACAGTTGACTGAAAAGAGCGATGTATATAGCTTTGGAGTGGTAATGCTGGAGCTGGTAACAGGAAGAAGACCAATAGAGCAAGGAAAATATATTGTGAGAGAGGTTTTAAGGTCAATGGATAAATCAAAAGAGTTATACAACCTTCATGCCATTCTTGACCCAACCATAACCAAAGAAACAACCCCTAAAGGCTTAGAGAAGTTTGTGAACCTGGCAATGAGGTGTGTCAAAGAAAATGCAGCTGAGAGGCCTACAATGGCTGAGGTAGTTAAGGAGATTGAGAATATAGTGGAGCTTGCTGGTTTGAACCCCACTTCTGAATCAGCAATAACATCAGAAACTTATGAGAATGCAAGTTGGGGGAAAGTTCACCATCCTTATGTTAATGAAGATTTTGCTTATACTGGGGTTTTTCCTTCAGTTACGGTAGAACCTCAATAA 2955 0.4115 MSKFRLMDQENKVFLLLLLLLFQVLLIAAQNPSEDFTALASLTEFWENKPSSWVGADPCGGWEGIRCRNSRVTSIIFSSMNLKGRLSGDIKSLSELLTLDLSFNKGLTGTIPGEIGDLKKLQTLTLVGCSFFGPIPESIGSLKQLSFLALNSNRFIGKIPRTIGNLSNIDWLDLADNQLEGSIPVSDDEGPGLDMLLKAEHFEGSKTMFTLCSHFGNNKLSGEIPAQLFSSNMHLKHLLFDSNQLNGSIPGTIGLVKSLEVVRLDRNQISGEVPSNLSNLINLSELYLSNNRLNGPIPDLTRLNLLTYVDLSNNTFNSTDIPSWASSLEFLTTLYVVPISFLLTPPYACMENTGLQGQIPGSLFNQSNIETVVLRNNLFDGTLDIGNAYSSHLQLTDLENNKITDFKQKNTENNITVILVRNPICIETGATSESYCKDSQPSISYLTPRNNCEPLLCSSDQVSSPNCKCAHPYTGLLFSRALSFSNLGNTSYYRALEQSLRDTFLSQNLPVDSVSLSNPFRNSSSDYFELTFNVFPSQTDRFNRTGVSSIAFVLSNQIFKPPEFFSPYFFIGDDYGYYAGEPATSKKSHTGVIVGAVVAVLVFLVLSLLAGIYAIRQKKRAKKAKDFNPFANWEENKNSGNAPQLKGARWFSFEELRKYSNNFIEANTIGSGGYGKVYQGVLPTGELVAIKRASQESMQGAVEFKTEIELLSRVHHKNLVGLVGFCFEKGEQMLVYEYIPNGTLMDSLSGKSGIIMDWMRRLKVALGAARGLAYLHELANPPIIHRDIKSSNILLDDYLNAKVADFGLSKLVDSERGHITTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVVMLELVTGRRPIEQGKYIVREVLRSMDKSKELYNLHAILDPTITKETTPKGLEKFVNLAMRCVKENAAERPTMAEVVKEIENIVELAGLNPTSESAITSETYENASWGKVHHPYVNEDFAYTGVFPSVTVEPQ 984
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi03g0740 984 CDD STKc_IRAK 669 934 - -
Glsi03g0740 984 Gene3D Transferase(Phosphotransferase) domain 1 739 950 - -
Glsi03g0740 984 FunFam Leucine-rich repeat protein kinase family protein 630 738 - -
Glsi03g0740 984 Gene3D Ribonuclease Inhibitor 34 194 IPR032675 -
Glsi03g0740 984 SUPERFAMILY Protein kinase-like (PK-like) 642 930 IPR011009 -
Glsi03g0740 984 ProSitePatterns Protein kinases ATP-binding region signature. 669 691 IPR017441 GO:0005524
Glsi03g0740 984 FunFam Leucine-rich repeat family protein 34 188 - -
Glsi03g0740 984 FunFam LRR receptor-like serine/threonine-protein kinase HSL2 739 947 - -
Glsi03g0740 984 ProSiteProfiles Leucine-rich repeat profile. 282 304 IPR001611 GO:0005515
Glsi03g0740 984 Gene3D Ribonuclease Inhibitor 212 300 IPR032675 -
Glsi03g0740 984 FunFam Leucine-rich repeat protein kinase family protein 189 299 - -
Glsi03g0740 984 Pfam Protein kinase domain 665 929 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi03g0740 984 ProSitePatterns Serine/Threonine protein kinases active-site signature. 783 795 IPR008271 GO:0004672|GO:0006468
Glsi03g0740 984 PANTHER RECEPTOR-LIKE PROTEIN 55 40 935 - -
Glsi03g0740 984 SMART serkin_6 663 935 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi03g0740 984 Gene3D Phosphorylase Kinase; domain 1 633 738 - -
Glsi03g0740 984 Gene3D Ribonuclease Inhibitor 301 444 IPR032675 -
Glsi03g0740 984 SUPERFAMILY L domain-like 41 344 - -
Glsi03g0740 984 ProSiteProfiles Protein kinase domain profile. 663 935 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi03g0740 Glsi-ChrGlsi03 28009485 28019643 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi03g0740 7 984 Receptor kinase-like Gene Family AT5G49760 53.815 0.0 964
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Glsi03g0740 Pkinase 1e-49 CL0016